Escherichia coli NMBU_W05E18 |
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Putative Escherichia coli NMBU_W05E18 RM systems
Ref: Finton,M.D. et al. unpublished
REBASE ref # 30302
| Sequence length: | GenBank #: | |
| Chromosome: | 5,299,922 bp | CP042878 |
| plasmid pNMBU-W05E18_01: | 132,874 bp | CP042879 |
| plasmid pNMBU-W05E18_02: | 49,825 bp | CP042880 |
| plasmid pNMBU-W05E18_03: | 66,300 bp | CP042881 |
REBASE acronym: EcoW05E18
Org_num: 40005
All begin FVA71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22280 | restriction endonuclease | |||
| 22285 | M | M.EcoW072ORF20660P (64% identity) | GGYANNNNNGTNG | M.EcoW05E18ORF22330AP |
| 22290 | IS6-like element IS26 family transposase | |||
| 22295 | DUF445 domain-containing protein | |||
| 22300 | Rpn family recombination-promoting | |||
| 22305 | GntR family transcriptional regulator | |||
| 22310 | DUF1127 domain-containing protein | |||
| 22315 | endoribonuclease SymE | |||
| 22320 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | EcoW05E18ORF22330P |
| 22325 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.EcoW05E18ORF22330P |
| 22330 | M | M.EcoU1II (35% identity) | GGYANNNNNGTNG | M.EcoW05E18ORF22330BP |
| 22335 | AraC family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 600 | integrase | |||
| 605 | M | M.Eco9071ORF110P (100% identity) | YGGCCR | M.EcoW05E18ORF605P |
| 610 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoW05E18ORF605P |
| 615 | transposase | |||
| 2365 | cell division protein DamX | |||
| 2370 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoW05E18DamP |
| 2375 | ribulose-phosphate 3-epimerase | |||
| 2910 | DUF2556 domain-containing protein | |||
| 2915 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoW05E18ORF2915P |
| 2920 | DNA-binding transcriptional regulator Fis | |||
| 10625 | phosphohydrolase | |||
| 10630 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.EcoW05E18DcmP |
| 10635 | V | V.SflFF64DcmP (100% identity) | V.EcoW05E18DcmP | |
| 10640 | drug/metabolite exporter YedA | |||
| 23690 | BREX-1 system phosphatase PglZ type A | |||
| 23695 | RM | EcoESBL15ORF22090P (100% identity) | EcoW05E18ORF23695P | |
| 23700 | DUF262 domain-containing protein | |||
| plasmid pNMBU-W05E18_01 | ||||
| 27020 | 73 aa hypothetical protein | |||
| 27025 | M | M.Sfl2142ORF380P (100% identity) | M.EcoW05E18ORF27025P | |
| 27030 | 102 aa hypothetical protein | |||
| plasmid pNMBU-W05E18_02 | ||||
| 27210 | 102 aa hypothetical protein | |||
| 27215 | M | M.EcoS045ORF105P (99% identity) | M.EcoW05E18ORF27215P | |
| 27220 | 73 aa hypothetical protein | |||
| plasmid pNMBU-W05E18_03 | ||||
| 27600 | 73 aa hypothetical protein | |||
| 27605 | M | M.EcoS045ORF105P (99% identity) | M.EcoW05E18ORF27215P | |
| 27610 | 102 aa hypothetical protein | |||