Campylobacter ornithocola LMG 29815 |
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Putative Campylobacter ornithocola LMG 29815 RM systems
Ref: Miller,W.G. and Yee,E. unpublished
REBASE ref # 27294
Complete sequence: 1,644,930 bp
GenBank #: CP053848
REBASE acronym: Cor29815
Org_num: 40248
All begin CORN_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 367 | sodium:proline symporter | |||
| 368 | R | Cla218ORF4060P (98% identity) | Cor29815ORF370P | |
| 369 | S | S.Cla218ORF4060P (72% identity) | S.Cor29815ORF370P | |
| 370 | M | M.Cla218ORF4060P (98% identity) | M.Cor29815ORF370P | |
| 371 | formate dehydrogenase biogenesis protein FdhU | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 33 | translation initiation factor IF-3 | |||
| 34 | M | M.Cla16701ORF33P (96% identity) | RAATTY | M.Cor29815ORF34P |
| 35 | 50S ribosomal protein L35 | |||
| 41 | SAM-dependent methyltransferase | |||
| 42 | RM | Cje5913ORF5140P (94% identity) | Cor29815ORF42P | |
| 43 | dihydroorotase, homodimeric type | |||
| 103 | imidazoleglycerol-phosphate dehydratase / | |||
| 104 | R | Cpe74ORF3675P (99% identity) | GATC | Cor29815ORF105P |
| ??? | M | M.Cpe74ORF3675P (98% identity) | GATC | M.Cor29815ORF105P |
| 106 | imidazole glycerol phosphate synthase HisFH, | |||
| 243 | tRNA U34 2-thiouridylase | |||
| 244 | R | Cla11937ORF256P (99% identity) | Cor29815ORF245P | |
| 245 | M | M.Cla11937ORF256P (99% identity) | M.Cor29815ORF245P | |
| 246 | phosphatidylglycerophosphatase A | |||
| 1224 | NAD-dependent protein deacetylase, SIR2 family | |||
| 1225 | RM | CjeCJ018ORF5620P (86% identity) | Cor29815ORF1225P | |
| 1226 | DNA mismatch binding protein, MutS2 family | |||
| 1530 | membrane protein | |||
| 1531 | RM | Cla10973ORF13620P (94% identity) | Cor29815ORF1531P | |
| 1532 | PD-(D/E)XK nuclease family protein | |||
| 1650 | recombination factor protein RarA | |||
| ??? | M | M1.Hpy117ORF7205P (55% identity) | M1.Cor29815ORF1652P | |
| 1653 | M | M1.HpyMT5114III (73% identity) | M2.Cor29815ORF1652P | |
| 1654 | R | Hce7128ORF3445P (64% identity) | Cor29815ORF1652P | |
| 1655 | DUF305 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1340 | ribose-phosphate diphosphokinase | |||
| 1341 | M | M.Csu24377ORF1554P (62% identity) | M.Cor29815ORF1341P | |
| 1342 | R | Csp10537ORF938P (92% identity) | Cor29815ORF1341P | |
| 1343 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 227 | 95 aa hypothetical protein | |||
| 228 | R | Cje083McrBP (62% identity) | Cor29815McrBP | |
| 229 | R | Cla11937McrCP (97% identity) | Cor29815McrCP | |
| 230 | diaminohydroxyphosphoribosylaminopyrimidine | |||