Escherichia coli O157:H7 DEC5A |
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Putative Escherichia coli O157:H7 DEC5A RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,303,225 bp | CP038394 |
| plasmid pDEC5A-4: | 66,091 bp | CP038397 |
REBASE acronym: EcoDEC5A
Org_num: 9040
All begin E3155_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22985 | DUF262 domain-containing protein | |||
| 22990 | R | EcoS946ORF14840P (100% identity) | CACNNNNNNNCTGG | EcoDEC5AORF22995P |
| 22995 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoDEC5AORF22995P |
| 23000 | S | S.EcoTB182AORF22480P (100% identity) | CACNNNNNNNCTGG | S.EcoDEC5AORF22995P |
| 23005 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2340 | cell division protein DamX | |||
| 2345 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoDEC5ADamP |
| 2350 | ribulose-phosphate 3-epimerase | |||
| 2865 | DUF2556 domain-containing protein | |||
| 2870 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoDEC5AORF3998P |
| 2875 | DNA-binding transcriptional regulator Fis | |||
| 10555 | phosphohydrolase | |||
| 10560 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoDEC5ADcmP |
| 10565 | V | V.EcosPA8DcmP (100% identity) | V.EcoDEC5ADcmP | |
| 10570 | drug/metabolite exporter YedA | |||
| 19790 | DUF1317 family protein | |||
| 19795 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoDEC5AORF565P |
| 19800 | cell division protein ZapA | |||
| 23220 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoDEC5AORF5139P |
| 23225 | DEAD/DEAH box helicase | |||
| 23255 | N-acetylneuraminate epimerase | |||
| 23260 | R | EcoS946ORF14580P (100% identity) | EcoDEC5AORF23260P | |
| 23265 | transposase | |||
| plasmid pDEC5A-4 | ||||
| 26480 | 59 aa hypothetical protein | |||
| 26485 | M | M.EcoTB182AORF25840P (100% identity) | M.EcoDEC5AORF3669P | |
| 26490 | 73 aa hypothetical protein | |||