Escherichia coli O157:H7 F8798 |
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Putative Escherichia coli O157:H7 F8798 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,569,928 bp | CP038351 |
| plasmid pF8798-1: | 92,209 bp | CP038352 |
REBASE acronym: EcoF8798
Org_num: 40035
All begin E4U69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25405 | DUF262 domain-containing protein | |||
| 25410 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoF8798ORF25415P |
| 25415 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoF8798ORF25415P |
| 25420 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoF8798ORF25415P |
| 25425 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF8798DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoF8798ORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 8920 | recombination protein NinB | |||
| 8925 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoF8798ORF8925P |
| 8930 | NinE family protein | |||
| 10400 | recombination protein NinB | |||
| 10405 | M | M.Eph2851ORFAP (99% identity) | GATC | M.EcoF8798ORF10405P |
| 10410 | NinE family protein | |||
| 11295 | phosphohydrolase | |||
| 11300 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF8798DcmP |
| 11305 | V | V.EcosPA8DcmP (100% identity) | V.EcoF8798DcmP | |
| 11310 | drug/metabolite exporter YedA | |||
| 13925 | 81 aa hypothetical protein | |||
| 13930 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoF8798ORF13930P | |
| 13935 | 329 aa hypothetical protein | |||
| 13940 | R | Ecos15739ORF2910P (100% identity) | EcoF8798ORF13930P | |
| 13945 | DUF1367 family protein | |||
| 16400 | 61 aa hypothetical protein | |||
| 16415 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoF8798ORF16415P | |
| 16420 | TrmB family transcriptional regulator | |||
| 25645 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoF8798ORF25645P |
| 25650 | DEAD/DEAH box helicase | |||
| 25680 | N-acetylneuraminate epimerase | |||
| 25685 | R | Ecos1613ORF26795P (100% identity) | EcoF8798ORF25685P | |
| 25690 | transposase | |||
| plasmid pF8798-1 | ||||
| 28865 | 59 aa hypothetical protein | |||
| 28870 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoF8798ORF28870P | |
| 28875 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9970 | recombination protein NinB | |||
| 9975 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoF8798ORF9975P |
| 9980 | NinE family protein | |||