Escherichia coli O157:H7 F8952 |
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Putative Escherichia coli O157:H7 F8952 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,399,622 bp | CP038349 |
| plasmid pF8952-1: | 92,716 bp | CP038350 |
REBASE acronym: EcoF8952
Org_num: 40036
All begin E4U62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24155 | DUF262 domain-containing protein | |||
| 24160 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoF8952ORF24165P |
| 24165 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoF8952ORF24165P |
| 24170 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoF8952ORF24165P |
| 24175 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoF8952DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoF8952ORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 9935 | phosphohydrolase | |||
| 9940 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoF8952DcmP |
| 9945 | V | V.EcosPA8DcmP (100% identity) | V.EcoF8952DcmP | |
| 9950 | drug/metabolite exporter YedA | |||
| 13110 | 81 aa hypothetical protein | |||
| 13115 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoF8952ORF13115P | |
| 13120 | 329 aa hypothetical protein | |||
| 13125 | R | Ecos15739ORF2910P (100% identity) | EcoF8952ORF13115P | |
| 13130 | DUF1367 family protein | |||
| 14340 | 61 aa hypothetical protein | |||
| 14355 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoF8952ORF14355P | |
| 14360 | TrmB family transcriptional regulator | |||
| 17720 | NinE family protein | |||
| 17725 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoF8952ORF17720P |
| 17730 | recombination protein NinB | |||
| 24395 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoF8952ORF24395P |
| 24400 | DEAD/DEAH box helicase | |||
| 24430 | N-acetylneuraminate epimerase | |||
| 24435 | R | Ecos1613ORF26795P (100% identity) | EcoF8952ORF24435P | |
| 24440 | transposase | |||
| plasmid pF8952-1 | ||||
| 27625 | 59 aa hypothetical protein | |||
| 27630 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoF8952ORF27630P | |
| 27635 | 73 aa hypothetical protein | |||