Escherichia coli O157:H7 LSU61 |
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Putative Escherichia coli O157:H7 LSU61 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,512,129 bp | CP038336 |
| plasmid pLSU61-1: | 119,161 bp | CP038338 |
REBASE acronym: EcoLSU61
Org_num: 6894
All begin E3165_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22545 | transcription factor | |||
| 22550 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.EcoLSU61ORF22550P |
| 22555 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.EcoLSU61ORF22550P |
| 22560 | DUF4433 domain-containing protein | |||
| 22565 | Appr-1-p processing protein | |||
| 22570 | R | Sbo49812IP (99% identity) | GAGNNNNNGTTY | EcoLSU61ORF22550P |
| 22575 | M48 family peptidase | |||
| 24450 | DUF262 domain-containing protein | |||
| 24455 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoLSU61ORF14871P |
| 24460 | M | M.EcosPA8ORF17615P (99% identity) | CACNNNNNNNCTGG | M.EcoLSU61ORF14871P |
| 24465 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoLSU61ORF14871P |
| 24470 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2350 | cell division protein DamX | |||
| 2355 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLSU61DamP |
| 2360 | ribulose-phosphate 3-epimerase | |||
| 2875 | DUF2556 domain-containing protein | |||
| 2880 | M | M.EcosPA8ORF11510P (99% identity) | ATGCAT | M.EcoLSU61ORF6885P |
| 2885 | DNA-binding transcriptional regulator Fis | |||
| 6585 | His-Xaa-Ser system radical SAM maturase HxsB | |||
| 6590 | M | M.EcoSO172ORF24410P (85% identity) | M.EcoLSU61ORF6590P | |
| 6595 | NinE family protein | |||
| 10580 | phosphohydrolase | |||
| 10585 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoLSU61DcmP |
| 10590 | V | V.EcosPA8DcmP (100% identity) | V.EcoLSU61DcmP | |
| 10595 | drug/metabolite exporter YedA | |||
| 13325 | TrmB family transcriptional regulator | |||
| 13330 | M | M.EcoEC0001ORF23140P (100% identity) | M.EcoLSU61ORF13330P | |
| 13345 | 61 aa hypothetical protein | |||
| 15080 | 106 aa hypothetical protein | |||
| 15085 | M | M.Eco09ORF8870P (100% identity) | M.EcoLSU61ORF15085P | |
| 15090 | 77 aa hypothetical protein | |||
| 24700 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoLSU61ORF14646P |
| 24705 | DEAD/DEAH box helicase | |||
| 24735 | N-acetylneuraminate epimerase | |||
| 24740 | R | EcoS946ORF14580P (100% identity) | EcoLSU61ORF24740P | |
| 24745 | transposase | |||
| 26105 | LexA family transcriptional regulator | |||
| 26110 | M | M.EcosA33ORF3820P (100% identity) | GATC | M.EcoLSU61ORF12713P |
| 26115 | PerC family transcriptional regulator | |||
| 26175 | Eae protein | |||
| 26180 | M | M.EcoE2855ORF5082P (100% identity) | M.EcoLSU61ORF26180P | |
| 26185 | 155 aa hypothetical protein | |||
| plasmid pLSU61-1 | ||||
| 28335 | 101 aa hypothetical protein | |||
| 28340 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoLSU61ORF28340P | |
| 28345 | 73 aa hypothetical protein | |||