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Putative Escherichia coli O157:H7 NE1127 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
Sequence length: | GenBank #: | |
Chromosome: | 5,513,087 bp | CP038321 |
plasmid pNE1127-1: | 92,701 bp | CP038323 |
plasmid pNE1127-2: | 145,329 bp | CP038322 |
REBASE acronym: EcoNE1127
Org_num: 40043
All begin E3168_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19435 | 64 aa hypothetical protein | |||
19440 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.EcoNE1127ORF19440P |
19445 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.EcoNE1127ORF19440P |
19450 | DUF4433 domain-containing protein | |||
19455 | Appr-1-p processing protein | |||
19460 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | EcoNE1127ORF19440P |
19465 | M48 family peptidase | |||
24830 | DUF262 domain-containing protein | |||
24835 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoNE1127ORF24840P |
24840 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoNE1127ORF24840P |
24845 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoNE1127ORF24840P |
24850 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2335 | cell division protein DamX | |||
2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoNE1127DamP |
2345 | ribulose-phosphate 3-epimerase | |||
2860 | DUF2556 domain-containing protein | |||
2865 | M | M.Eco11691ORF2865P (100% identity) | ATGCAT | M.EcoNE1127ORF2865P |
2870 | DNA-binding transcriptional regulator Fis | |||
8855 | recombination protein NinB | |||
8860 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoNE1127ORF8860P |
8865 | NinE family protein | |||
10340 | phosphohydrolase | |||
10345 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoNE1127DcmP |
10350 | V | V.EcosPA8DcmP (100% identity) | V.EcoNE1127DcmP | |
10355 | drug/metabolite exporter YedA | |||
14185 | DUF1367 family protein | |||
14190 | R | Ecos15739ORF2910P (100% identity) | EcoNE1127ORF14200P | |
14195 | 329 aa hypothetical protein | |||
14200 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoNE1127ORF14200P | |
14205 | 81 aa hypothetical protein | |||
15105 | 61 aa hypothetical protein | |||
15120 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoNE1127ORF15120P | |
15125 | TrmB family transcriptional regulator | |||
18160 | NinE family protein | |||
18165 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoNE1127ORF18165P |
18170 | recombination protein NinB | |||
25070 | RM | EcoOS292II (100% identity) | GAAABCC | EcoNE1127ORF25070P |
25075 | DEAD/DEAH box helicase | |||
25105 | N-acetylneuraminate epimerase | |||
25110 | R | Ecos1613ORF26795P (100% identity) | EcoNE1127ORF25110P | |
25115 | transposase | |||
plasmid pNE1127-1 | ||||
29340 | 73 aa hypothetical protein | |||
29345 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoNE1127ORF29345P | |
29350 | 59 aa hypothetical protein | |||
plasmid pNE1127-2 | ||||
28640 | 100 aa hypothetical protein | |||
28645 | M | M.YrupYR1ORFCP (100% identity) | M.EcoNE1127ORF28645P | |
28650 | 158 aa hypothetical protein |