Escherichia coli O157:H7 NE92 |
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Putative Escherichia coli O157:H7 NE92 RM systems
Ref: Bono,J.L. unpublished
REBASE ref # 30303
| Sequence length: | GenBank #: | |
| Chromosome: | 5,406,716 bp | CP038316 |
| plasmid pNE92-1: | 92,578 bp | CP038318 |
REBASE acronym: EcoNE92
Org_num: 40045
All begin E3166_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24010 | DUF262 domain-containing protein | |||
| 24015 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoNE92ORF24020P |
| 24020 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoNE92ORF24020P |
| 24025 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoNE92ORF24020P |
| 24030 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoNE92DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2860 | DUF2556 domain-containing protein | |||
| 2865 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoNE92ORF2865P |
| 2870 | DNA-binding transcriptional regulator Fis | |||
| 9635 | recombination protein NinB | |||
| 9640 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoNE92ORF9640P |
| 9645 | NinE family protein | |||
| 10530 | phosphohydrolase | |||
| 10535 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoNE92DcmP |
| 10540 | V | V.EcosPA8DcmP (100% identity) | V.EcoNE92DcmP | |
| 10545 | drug/metabolite exporter YedA | |||
| 14945 | 61 aa hypothetical protein | |||
| 14960 | M | M.EcoGim11ORF14165P (100% identity) | M.EcoNE92ORF14960P | |
| 14965 | TrmB family transcriptional regulator | |||
| 22345 | toxin | |||
| 22350 | M | M.Ecos32ORF15460P (100% identity) | M.EcoNE92ORF22350P | |
| 22355 | R | Ecos32ORF15460P (100% identity) | EcoNE92ORF22350P | |
| 22365 | glutamate-5-semialdehyde dehydrogenase | |||
| 24255 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoNE92ORF24255P |
| 24260 | DEAD/DEAH box helicase | |||
| 24290 | N-acetylneuraminate epimerase | |||
| 24295 | R | EcoGim11ORF24325P (100% identity) | EcoNE92ORF24295P | |
| 24300 | transposase | |||
| plasmid pNE92-1 | ||||
| 27855 | 101 aa hypothetical protein | |||
| 27860 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoNE92ORF27860P | |
| 27865 | 73 aa hypothetical protein | |||