Citrobacter freundii CitB |
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Putative Citrobacter freundii CitB RM systems
Ref: Martins,W.M.B.S. unpublished
REBASE ref # 30398
| Sequence length: | GenBank #: | |
| Chromosome: | 4,827,866 bp | CP048416 |
| plasmid pA_CitB: | 110,347 bp | CP048417 |
REBASE acronym: CfrCitB
Org_num: 40309
All begin GZ999_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3135 | RNA-directed DNA polymerase | |||
| 3140 | M | M.CbrSOC06ORF3170P (100% identity) | M.CfrCitBORF3140P | |
| 3145 | S | S.Cpo1I (100% identity) | S.CfrCitBORF3140P | |
| 3150 | R | Cpo1IP (100% identity) | CfrCitBORF3140P | |
| 3155 | AAA domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1615 | cell division protein DamX | |||
| 1620 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrCitBDamP |
| 1625 | ribulose-phosphate 3-epimerase | |||
| 2160 | DUF2556 domain-containing protein | |||
| 2165 | M | M.Csp107ORF2805P (100% identity) | ATGCAT | M.CfrCitBORF2165P |
| 2170 | DNA-binding transcriptional regulator Fis | |||
| 9180 | phosphohydrolase | |||
| 9185 | M | M.CfrZY198ORF9290P (100% identity) | CCWGG | M.CfrCitBORF9185P |
| 9190 | V | V.CspS39ORF13780P (100% identity) | V.CfrCitBORF9185P | |
| 9195 | drug/metabolite exporter YedA | |||
| 19665 | HNH endonuclease | |||
| 19670 | R | CfrZY198ORF20605P (100% identity) | CfrCitBORF19670P | |
| 19675 | helix-turn-helix transcriptional regulator | |||
| 19675 | helix-turn-helix transcriptional regulator | |||
| 19680 | R | Pag124ORF16845P (95% identity) | CfrCitBORF19685P | |
| 19685 | M | M.Pag124ORF16845P (96% identity) | M.CfrCitBORF19685P | |
| 19690 | DNA primase | |||
| plasmid pA_CitB | ||||
| 23270 | 76 aa hypothetical protein | |||
| 23275 | M | M.SphSSU5ORF88P (96% identity) | M.CfrCitBORF23275P | |
| 23280 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3150 | type I restriction endonuclease subunit R | |||
| 3155 | R | CbrP1McrBP (100% identity) | CfrCitBMcrBP | |
| 3160 | R | Cpo1McrCP (99% identity) | CfrCitBMcrCP | |
| 3165 | transcriptional regulator | |||