Neisseria gonorrhoeae NG196 |
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Putative Neisseria gonorrhoeae NG196 RM systems
Ref: Cherdtrakulkiat,T. et al. Microbiol Resour Announc 9 (19), e00198-20 (2020)
REBASE ref # 30553
Complete sequence: 2,218,879 bp
GenBank #: CP043871
REBASE acronym: NgoNG196
Org_num: 40727
All begin F0T10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2330 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2335 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.NgoNG196ORF2335P |
| 2340 | DNA damage-inducible protein D | |||
| 2345 | S | S.NgoNG290ORF2325P (100% identity) | GCANNNNNNNGTC | S.NgoNG196ORF2335P |
| 2350 | R | Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | NgoNG196ORF2335P |
| 2355 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3900 | replication-associated recombination protein A | |||
| 3905 | R | NgoNG290ORF3925P (100% identity) | GAGNNNNNTAC | NgoNG196ORF3930P |
| 3910 | hydroxyacid dehydrogenase | |||
| 3915 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoNG196ORF3930P |
| 3920 | 186 aa hypothetical protein | |||
| 3925 | 280 aa hypothetical protein | |||
| 3930 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.NgoNG196ORF3930P |
| 3935 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | leucine--tRNA ligase | |||
| 50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoNG196ORF55P |
| 55 | DNA adenine methylase | |||
| 55 | DNA adenine methylase | |||
| 60 | M | M.Ngos1291ORF5755P (100% identity) | M.NgoNG196ORF60P | |
| 65 | 184 aa hypothetical protein | |||
| 1725 | phenylalanine--tRNA ligase subunit alpha | |||
| 1730 | V | V.NgoWSORF391P (100% identity) | V.NgoNG196ORF1735P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoNG196ORF1735P | |
| 1745 | R | NgoWSORF391P (100% identity) | NgoNG196ORF1735P | |
| 1750 | phenylalanine--tRNA ligase subunit beta | |||
| 2045 | IS1595 family transposase | |||
| 2050 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoNG196ORF2050P |
| 2055 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoNG196ORF2050P |
| 2060 | 141 aa hypothetical protein | |||
| 2080 | uroporphyrinogen decarboxylase | |||
| 2085 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoNG196ORF2095P | |
| 2090 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoNG196ORF2095P |
| 2095 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoNG196ORF2095P |
| 2100 | 70 aa hypothetical protein | |||
| 3780 | 3-isopropylmalate dehydrogenase | |||
| 3785 | R | NgoWLORF945P (100% identity) | GGNNCC | NgoNG196ORF3790P |
| 3790 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoNG196ORF3790P |
| 3795 | 3-isopropylmalate dehydratase small subunit | |||
| 5210 | anthranilate synthase component I | |||
| 5215 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoNG196ORF5215P |
| 5220 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoNG196ORF5215P |
| 5225 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6870 | replication initiation factor | |||
| 6875 | V | V.Ngos1291ORF65P (100% identity) | V.NgoNG196ORF6885P | |
| 6880 | R | Ngos1291ORF65P (100% identity) | NgoNG196ORF6885P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoNG196ORF6885P | |
| 6895 | 48 aa hypothetical protein | |||
| 7105 | excinuclease ABC subunit UvrA | |||
| 7110 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoNG196ORF7115P |
| 7115 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoNG196ORF7115P |
| 7120 | transposase | |||
| 10800 | FUSC family protein | |||
| 10805 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoNG196ORF10810P |
| 10810 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.NgoNG196ORF10810P |
| 10815 | ribosome recycling factor | |||
| 11380 | 93 aa hypothetical protein | |||
| 11385 | R | NgoWSIIIP (100% identity) | GGTGA | NgoNG196ORF11390P |
| 11390 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoNG196ORF11390P |
| 11395 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoNG196ORF11390P |
| 11400 | RNA-binding transcriptional accessory protein | |||
| 12030 | GTPase ObgE | |||
| 12035 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoNG196ORF12035P |
| 12040 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoNG196ORF12035P |
| 12045 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3070 | peptidyl-prolyl cis-trans isomerase | |||
| 3075 | M | M.NgoNG290ORF3070P (100% identity) | CCACC | M.NgoNG196ORF3075P |
| 3080 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoNG196ORF3075P |
| 3085 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3565 | alpha-hydroxy-acid oxidizing protein | |||
| 3570 | R | Ngos1291ORF8930P (100% identity) | NgoNG196ORF3575P | |
| ??? | M | M.NgoH041ORF1077P (100% identity) | M.NgoNG196ORF3575P | |
| 3585 | tRNA pseudouridine(55) synthase TruB | |||