Bacteroides dorei DSM 17855 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides dorei DSM 17855 RM systems
Ref: Russell,J.T. unpublished
REBASE ref # 29777
Complete sequence: 5,625,488 bp
GenBank #: CP046176
REBASE acronym: Bdo17855
Org_num: 7638
All begin GKD17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9970 | 67 aa hypothetical protein | |||
| 9975 | S | S1.Pvu1099ORF215P (100% identity) | S.Bdo17855ORF9980P | |
| 9980 | M | M.Pdo17855ORF16765P (100% identity) | M.Bdo17855ORF9980P | |
| 9985 | DUF2971 domain-containing protein | |||
| 9990 | C | C.Pvu1099ORF215P (100% identity) | C.Bdo17855ORF9980P | |
| 9995 | IS5 family transposase | |||
| 13455 | tyrosine-type recombinase/integrase | |||
| 13460 | S | S6.Pdo17855ORF20280P (95% identity) | S.Bdo17855ORF13460P | |
| 13465 | restriction endonuclease subunit S | |||
| 13485 | restriction endonuclease subunit S | |||
| 13490 | S | S1.Pdo17855ORF20280P (99% identity) | CCAYNNNNNNTGA | S.Bdo17855III |
| 13495 | cell filamentation protein Fic | |||
| 13500 | M | M.Pdo17855ORF20280P (100% identity) | CCAYNNNNNNTGA | M.Bdo17855III |
| 13505 | 307 aa hypothetical protein | |||
| 13510 | R | R1.Pdo17855ORF20280P (100% identity) | CCAYNNNNNNTGA | Bdo17855IIIP |
| 13515 | helix-turn-helix domain-containing protein | |||
| 16045 | cell surface protein | |||
| 16050 | S | S5.Pdo17855ORF22875P (100% identity) | S3.Bdo17855IIP | |
| 16055 | restriction endonuclease subunit S | |||
| 16060 | tyrosine-type recombinase/integrase | |||
| 16065 | S | S2.Pdo17855ORF22875P (100% identity) | GAAGNNNNNNNTGG | S2.Bdo17855II |
| 16070 | S | S1.Pdo3716YORF13100P (100% identity) | S1.Bdo17855IIP | |
| 16075 | M | M.PmeBin22ORFGP (100% identity) | GAAGNNNNNNNTGG | M.Bdo17855II |
| 16080 | R | PmeBin22ORFGP (100% identity) | GAAGNNNNNNNTGG | Bdo17855IIP |
| 16085 | C | C.Pvu201ORF22395P (100% identity) | C.Bdo17855IIP | |
| 16090 | DUF4357 domain-containing protein | |||
| 18045 | S-adenosylmethionine:tRNA | |||
| 18050 | M | M.Pdo3716YORF6360P (100% identity) | CAAYNNNNNNNTGAY | M.Bdo17855IV |
| 18055 | S | S1.Pdo17855ORF1705P (100% identity) | CAAYNNNNNNNTGAY | S1.Bdo17855IV |
| 18060 | S | S2.Pdo2ORF20950P (100% identity) | S2.Bdo17855IVP | |
| 18065 | R | Pdo17855ORF1705P (100% identity) | CAAYNNNNNNNTGAY | Bdo17855IVP |
| 18070 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3530 | 462 aa hypothetical protein | |||
| 3535 | M | M.Pvu626ORF9540P (100% identity) | M.Bdo17855ORF3535P | |
| 3540 | AAA family ATPase | |||
| 5505 | 120 aa hypothetical protein | |||
| 5510 | R | Pdo17855ORF12370P (100% identity) | Bdo17855ORF5515P | |
| 5515 | M | M.Pdo17855ORF12370P (96% identity) | M.Bdo17855ORF5515P | |
| 5520 | C | C.Pme1586ORF15675P (59% identity) | C.Bdo17855ORF5515P | |
| 5525 | conjugal transfer protein TraG | |||
| 8345 | AAA family ATPase | |||
| 8350 | R | Pdo17855ORF15140P (100% identity) | GGTNACC | Bdo17855IP |
| 8355 | M | M.Pdo17855ORF15140P (100% identity) | GGTNACC | M.Bdo17855I |
| 8360 | 104 aa hypothetical protein | |||
| 12225 | 318 aa hypothetical protein | |||
| 12230 | V | V.Pdo17855ORF19035P (100% identity) | V.Bdo17855ORF12255P | |
| 12235 | 781 aa hypothetical protein | |||
| 12240 | PD-(D/E)XK motif protein | |||
| 12245 | R | Pdo17855ORF19035P (100% identity) | Bdo17855ORF12255P | |
| 12250 | ATP-binding protein | |||
| 12255 | M | M.Pdo17855ORF19035P (100% identity) | M.Bdo17855ORF12255P | |
| 12260 | C | C.Pdo17855ORF19035P (100% identity) | C.Bdo17855ORF12255P | |
| 12265 | DUF2958 domain-containing protein | |||
| 15240 | alpha-amylase | |||
| 15245 | R | PmeBin22ORFFP (100% identity) | Bdo17855ORF15245P | |
| 15250 | 71 aa hypothetical protein | |||