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Putative Bacteroides dorei JR05 RM systems
Ref: Russell,J.T. unpublished
REBASE ref # 29777
Complete sequence: 5,571,237 bp
GenBank #: CP046428
REBASE acronym: BdoJR05
Org_num: 39854
All begin GN309_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
585 | helix-turn-helix domain-containing protein | |||
590 | HsdR family type I site-specific | |||
585 | helix-turn-helix domain-containing protein | |||
590 | R | Bsp3716PORF21890P (100% identity) | CAGNNNNNTGT | BdoJR05IIIP |
??? | M | M.BdoJR04I (100% identity) | CAGNNNNNTGT | M.BdoJR05III |
600 | DUF1016 family protein | |||
605 | 99 aa hypothetical protein | |||
610 | S | S2.Bov299ORF4215P (100% identity) | S2.BdoJR05IIIP | |
615 | S | S3.BdoJR04I (100% identity) | CAGNNNNNTGT | S3.BdoJR05III |
620 | tyrosine-type recombinase/integrase | |||
625 | S | S3.Bsp3716PORF21890P (54% identity) | S4.BdoJR05IIIP | |
630 | 182 aa hypothetical protein | |||
3675 | WYL domain-containing protein | |||
3680 | R | Pdo17855ORF1705P (100% identity) | CAAYNNNNNNCTG | BdoJR05IIP |
3685 | S | S2.PmeBin22ORFCP (100% identity) | S2.BdoJR05IIP | |
3690 | S | S1.Pdo1051II (100% identity) | CAAYNNNNNNCTG | S1.BdoJR05II |
3695 | M | M.PmeBin22ORFCP (100% identity) | CAAYNNNNNNCTG | M.BdoJR05II |
3700 | S-adenosylmethionine:tRNA | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
580 | 317 aa hypothetical protein | |||
585 | C | C.Bsp3716PORF21890P (100% identity) | C.BdoJR05ORF585P | |
590 | HsdR family type I site-specific | |||
6775 | phosphoadenosine phosphosulfate reductase family | |||
6780 | M | M.BdoJR04ORF16385P (100% identity) | M.BdoJR05ORF6780P | |
6785 | 335 aa hypothetical protein | |||
6790 | 190 aa hypothetical protein | |||
6795 | M | M.BdoJR04ORF16370P (100% identity) | M.BdoJR05ORF6795P | |
6800 | 204 aa hypothetical protein | |||
7005 | 71 aa hypothetical protein | |||
7010 | R | Pdo1051ORF14185P (100% identity) | BdoJR05ORF7010P | |
7015 | alpha-amylase | |||
7595 | thymidylate synthase | |||
7600 | M | M.Uph2207ORFAP (100% identity) | M.BdoJR05ORF7600P | |
7605 | ornithine cyclodeaminase | |||
8175 | 60 aa hypothetical protein | |||
8180 | M | M.Pdo1051ORF13020P (100% identity) | M.BdoJR05ORF8180P | |
8185 | ATP-binding protein | |||
12270 | DUF4373 domain-containing protein | |||
12275 | M | M.BdoJR04ORF10890P (100% identity) | M.BdoJR05ORF12275P | |
12280 | 65 aa hypothetical protein | |||
13930 | peptidoglycan DD-metalloendopeptidase family | |||
13935 | M | M.Pdo1047IV (100% identity) | M.BdoJR05ORF13935P | |
13940 | radical SAM protein | |||
17520 | AAA family ATPase | |||
17525 | R | R2.Pdo1051ORF4310P (100% identity) | R1.BdoJR05ORF17535P | |
17530 | C | C.Pdo1051ORF4310P (100% identity) | C.BdoJR05ORF17535P | |
17535 | M | M2.Pdo1051ORF4310P (100% identity) | M1.BdoJR05ORF17535P | |
17540 | M | M1.Pdo1051ORF4310P (100% identity) | M2.BdoJR05ORF17535P | |
17545 | R | R1.Pdo1051ORF4310P (100% identity) | R2.BdoJR05ORF17535P | |
17550 | V | V.Pdo1051ORF4310P (100% identity) | V.BdoJR05ORF17535P | |
17555 | DNA-binding protein | |||
21065 | 320 aa hypothetical protein | |||
21070 | M | M.Pdo1051ORF20555P (100% identity) | M.BdoJR05ORF21070P | |
21075 | recombinase family protein | |||
21450 | 156 aa hypothetical protein | |||
??? | M | M.Bfr18BORF3050P (100% identity) | M.BdoJR05ORF21455P | |
21465 | DUF3846 domain-containing protein |