Salmonella enterica subsp. enterica LHST_2018 |
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Putative Salmonella enterica subsp. enterica LHST_2018 RM systems
Ref: Jacob,J. et al. unpublished
REBASE ref # 30673
Complete sequence: 4,812,517 bp
GenBank #: CP052767
REBASE acronym: Sen2018
Org_num: 41057
All begin HI825_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19625 | restriction endonuclease | |||
| 19630 | R | Sen82356ORFJP (100% identity) | GAANNNNNNNNTCGC | Sen2018ORF19635P |
| 19635 | M | M.StyTORF4575P (88% identity) | GAANNNNNNNNTCGC | M.Sen2018ORF19635P |
| 19640 | 46 aa hypothetical protein | |||
| 19645 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen2018ORF19635P |
| 19650 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1750 | cell division protein DamX | |||
| 1755 | M | M.StyTDamP (100% identity) | GATC | M.Sen2018DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2450 | DUF2556 family protein | |||
| 2455 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2018ORF2455P |
| 2460 | DNA-binding transcriptional regulator Fis | |||
| 3360 | DUF2732 family protein | |||
| 3365 | M | M.Sen82356ORFDP (100% identity) | M.Sen2018ORF3365P | |
| 3370 | replication endonuclease | |||
| 9470 | DUF4060 family protein | |||
| ??? | M | M.SenCEPR1ORF14095P (100% identity) | M.Sen2018ORF9475P | |
| 9480 | DGQHR domain-containing protein | |||
| 9535 | ead/Ea22-like family protein | |||
| 9540 | M | M.StyTORF1914P (100% identity) | M.Sen2018ORF9540P | |
| 9545 | DUF550 domain-containing protein | |||
| 14760 | drug/metabolite exporter YedA | |||
| 14765 | V | V.StyTDcmP (100% identity) | V.Sen2018DcmP | |
| 14770 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen2018DcmP |
| 14775 | phosphohydrolase | |||
| 19765 | YebC/PmpR family DNA-binding transcriptional | |||
| 19770 | R | Senst12ORF9665P (100% identity) | Sen2018ORF19770P | |
| 19775 | 64 aa hypothetical protein | |||
| 20835 | 3-5 exonuclease | |||
| 20840 | M | M.StyTORF4329P (100% identity) | M2.Sen2018ORF20830P | |
| 20845 | replication endonuclease | |||
| 22490 | TraR/DksA family transcriptional regulator | |||
| 22495 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen2018ORF22495P |
| 22500 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6570 | MFS transporter | |||
| 6575 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen2018ORF6575P |
| 6580 | R | StyTORF2507P (99% identity) | CAGAG | Sen2018ORF6575P |
| 6585 | 33 aa hypothetical protein | |||
| 14845 | SpnT protein | |||
| 14850 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen2018ORF14850P | |
| 14855 | R | StyTORF872P (100% identity) | Sen2018ORF14850P | |
| 14860 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19620 | BrnT family toxin | |||
| 19625 | R | StyTMrrP (100% identity) | Sen2018MrrP | |
| 19630 | type I restriction-modification system | |||