Lactobacillus paracasei 347-16 |
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Putative Lactobacillus paracasei 347-16 RM systems
Ref: Borovkova,E. et al. unpublished
REBASE ref # 30493
| Sequence length: | GenBank #: | |
| Chromosome: | 3,102,350 bp | CP052065 |
| plasmid unnamed1: | 64,761 bp | CP052066 |
| plasmid unnamed2: | 51,922 bp | CP052067 |
REBASE acronym: Lpa34716
Org_num: 40605
All begin GJS60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11140 | DUF262 domain-containing protein | |||
| 11145 | S | S2.Lpa566ORF9175P (99% identity) | S2.Lpa34716ORF11160P | |
| 11150 | site-specific integrase | |||
| 11155 | S | S1.LpaF11ORF10910P (94% identity) | S1.Lpa34716ORF11160P | |
| 11160 | M | M.LpaXI3ORFBP (100% identity) | M.Lpa34716ORF11160P | |
| 11165 | R | LpaXI3ORFBP (100% identity) | Lpa34716ORF11160P | |
| 11170 | 188 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 15375 | IS5 family transposase | |||
| 15380 | S | S.Lpa566ORF15750P (100% identity) | S.Lpa34716ORF15385P | |
| 15385 | M | M.Lpa566ORF15750P (100% identity) | M.Lpa34716ORF15385P | |
| 15390 | R | Lpa566ORF15750P (100% identity) | Lpa34716ORF15385P | |
| 15395 | cysteine synthase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4935 | 143 aa hypothetical protein | |||
| 4940 | M | M.LpaF11ORF4785P (100% identity) | M.Lpa34716ORF4940P | |
| 4945 | 69 aa hypothetical protein | |||
| 10490 | IS30 family transposase | |||
| 10495 | M | M.LpaXI3ORFCP (98% identity) | M.Lpa34716ORF10495P | |
| 10500 | ATP-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 15875 | IS5 family transposase | |||
| 15880 | R | LrhVSI43ORF12130P (100% identity) | CCAAAA | Lpa34716ORF15885P |
| 15885 | M | M.LpaF11ORF15205P (100% identity) | CCAAAA | M.Lpa34716ORF15885P |
| 15890 | 29 aa hypothetical protein | |||