Neisseria gonorrhoeae TUM16691 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae TUM16691 RM systems
Ref: Hanao,M. et al. unpublished
REBASE ref # 30554
Complete sequence: 2,167,195 bp
GenBank #: AP023075
REBASE acronym: Ngo16691
Org_num: 40732
All begin TUM16691C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4510 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 4520 | M | M.Ngos1291ORF7750P (100% identity) | M.Ngo16691ORF4520P | |
| 4530 | DNA damage-inducible protein D | |||
| ??? | S | S.NgoJH16ORFHP (100% identity) | GACNNNNNNNTGC | S1.Ngo16691ORF4520P |
| 4560 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.Ngo16691ORF4520P |
| 4570 | R | NgoWSIIP (100% identity) | Ngo16691ORF4520P | |
| 4580 | ATP-dependent Clp protease ATP-binding subunit | |||
| 7490 | ATPase AAA | |||
| 7500 | R | NgoWSIP (100% identity) | GAGNNNNNTAC | Ngo16691ORF7550P |
| 7510 | 77 aa hypothetical protein | |||
| 7520 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo16691ORF7550P |
| 7530 | 186 aa hypothetical protein | |||
| 7540 | 279 aa hypothetical protein | |||
| 7550 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo16691ORF7550P |
| 7560 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | leucine--tRNA ligase | |||
| 70 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo16691ORF70P |
| ??? | site-specific DNA-methyltransferase | |||
| 70 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | M.Ngo16691ORF80P | |
| 90 | 151 aa hypothetical protein | |||
| 2260 | IS1595 family transposase | |||
| 2270 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo16691ORF2270P |
| 2280 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo16691ORF2270P |
| 2290 | UvrABC system protein A | |||
| 3460 | phenylalanine--tRNA ligase alpha subunit | |||
| 3470 | V | V.NgoWSORF391P (100% identity) | V.Ngo16691ORF3480P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo16691ORF3480P | |
| 3500 | R | NgoWSORF391P (100% identity) | Ngo16691ORF3480P | |
| 3510 | phenylalanine--tRNA ligase beta subunit | |||
| 4030 | 215 aa hypothetical protein | |||
| 4040 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo16691ORF4040P |
| 4050 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo16691ORF4040P |
| 4060 | 140 aa hypothetical protein | |||
| 4100 | uroporphyrinogen decarboxylase | |||
| 4110 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo16691ORF4130P | |
| 4120 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo16691ORF4130P |
| 4130 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo16691ORF4130P |
| 4140 | 86 aa hypothetical protein | |||
| 7240 | 3-isopropylmalate dehydrogenase | |||
| 7250 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo16691ORF7260P |
| 7260 | M | M.Ngo19855ORF7240P (100% identity) | GGNNCC | M.Ngo16691ORF7260P |
| 7270 | 3-isopropylmalate dehydratase small subunit | |||
| 9170 | anthranilate synthase component 1 | |||
| 9180 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo16691ORF9180P |
| 9190 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo16691ORF9180P |
| 9200 | N5-carboxyaminoimidazole ribonucleotide | |||
| 15870 | 449 aa hypothetical protein | |||
| 15880 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo16691ORF15910P | |
| ??? | R | NgoWSORF1801P (100% identity) | Ngo16691ORF15910P | |
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo16691ORF15910P | |
| 15920 | pilus assembly protein PilE | |||
| 18010 | cysteine--tRNA ligase | |||
| 18020 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo16691ORF18030P |
| 18030 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo16691ORF18030P |
| 18040 | GTPase Obg | |||
| 18950 | RNA-binding protein | |||
| 18960 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo16691ORF18960P |
| 18970 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo16691ORF18960P |
| 18980 | R | NgoWFIIP (100% identity) | GGTGA | Ngo16691ORF18960P |
| 18990 | sodium/glutamate symporter | |||
| 20030 | ribosome-recycling factor | |||
| 20040 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo16691ORF20040P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo16691ORF20040P |
| 20070 | membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5940 | peptidyl-prolyl cis-trans isomerase | |||
| 5950 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo16691ORF5950P |
| 5960 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo16691ORF5950P |
| 5970 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
| 6900 | alpha-hydroxy-acid oxidizing enzyme | |||
| 6910 | R | NgoWSORF749P (100% identity) | Ngo16691ORF6920P | |
| ??? | M | M.NgoNG290ORF3570P (100% identity) | M.Ngo16691ORF6920P | |
| 6940 | tRNA pseudouridine synthase B | |||