Ref: Hanao,M. et al. unpublished

REBASE ref # 30554

Complete sequence: 2,167,195 bp

GenBank #: AP023075

REBASE acronym: Ngo16691

Org_num: 40732

 

All begin TUM16691C_

Type I
ORF Gene Most similar Specificity Name
 
4510 ADP-L-glycero-D-manno-heptose-6-epimerase
4520 M M.Ngos1291ORF7750P (100% identity) M.Ngo16691ORF4520P
4530 DNA damage-inducible protein D
??? S S.NgoJH16ORFHP (100% identity) GACNNNNNNNTGC S1.Ngo16691ORF4520P
4560 S S2.NgoWSII (100% identity) GCANNNNNNNNTGC S2.Ngo16691ORF4520P
4570 R NgoWSIIP (100% identity) Ngo16691ORF4520P
4580 ATP-dependent Clp protease ATP-binding subunit
 
7490 ATPase AAA
7500 R NgoWSIP (100% identity) GAGNNNNNTAC Ngo16691ORF7550P
7510 77 aa hypothetical protein
7520 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo16691ORF7550P
7530 186 aa hypothetical protein
7540 279 aa hypothetical protein
7550 M M.NgoWSI (100% identity) GAGNNNNNTAC M.Ngo16691ORF7550P
7560 3,4-dihydroxy-2-butanone-4-phosphate synthase
Type II
ORF Gene Most similar Specificity Name
 
60 leucine--tRNA ligase
70 R restriction endonuclease GATC Ngo16691ORF70P
??? site-specific DNA-methyltransferase
 
70 restriction endonuclease
??? M M.NgoWOORF8P (100% identity) M.Ngo16691ORF80P
90 151 aa hypothetical protein
 
2260 IS1595 family transposase
2270 M M.NgoWSORF259P (100% identity) CCGCGG M.Ngo16691ORF2270P
2280 R NgoWSORF259P (100% identity) CCGCGG Ngo16691ORF2270P
2290 UvrABC system protein A
 
3460 phenylalanine--tRNA ligase alpha subunit
3470 V V.NgoWSORF391P (100% identity) V.Ngo16691ORF3480P
??? M M.NgoWSORF391P (100% identity) M.Ngo16691ORF3480P
3500 R NgoWSORF391P (100% identity) Ngo16691ORF3480P
3510 phenylalanine--tRNA ligase beta subunit
 
4030 215 aa hypothetical protein
4040 RM NgoWSORF450P (100% identity) GACNNNNNTGA Ngo16691ORF4040P
4050 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.Ngo16691ORF4040P
4060 140 aa hypothetical protein
 
4110 DEAD/DEAH box helicase
4120 R NgoWSORF459P (100% identity) GCSGC Ngo16691ORF4130P
4130 M M.NgoWSORF459P (100% identity) GCSGC M1.Ngo16691ORF4130P
??? 119 aa hypothetical protein TUM15748C_12930
 
7240 3-isopropylmalate dehydrogenase
7250 R NgoWSORF784P (100% identity) GGNNCC Ngo16691ORF7260P
7260 M M.Ngo19855ORF7240P (100% identity) GGNNCC M.Ngo16691ORF7260P
7270 3-isopropylmalate dehydratase small subunit
 
9170 anthranilate synthase component 1
9180 M M.NgoWSORF1056P (100% identity) GCCGGC M.Ngo16691ORF9180P
9190 R NgoWSORF1056P (100% identity) GCCGGC Ngo16691ORF9180P
9200 N5-carboxyaminoimidazole ribonucleotide
 
15870 449 aa hypothetical protein
15880 V very short patch repair endonuclease V.Ngo16691ORF15910P
??? R NgoWSORF1801P (100% identity) Ngo16691ORF15910P
??? M M.NgoSH240ORFLP (100% identity) M.Ngo16691ORF15910P
15920 pilus assembly protein PilE
 
18010 cysteine--tRNA ligase
18020 R NgoWSORF2052P (100% identity) RGCGCY Ngo16691ORF18030P
18030 M M.NgoWSORF2052P (100% identity) RGCGCY M.Ngo16691ORF18030P
18040 GTPase Obg
 
18950 RNA-binding protein
18960 M M1.NgoWSIII (100% identity) GGTGA M1.Ngo16691ORF18960P
18970 M M2.NgoWSIII (100% identity) GGTGA M2.Ngo16691ORF18960P
18980 R NgoWFIIP (100% identity) GGTGA Ngo16691ORF18960P
18990 sodium/glutamate symporter
 
20030 ribosome-recycling factor
20040 M site-specific DNA-methyltransferase GGCC M.Ngo16691ORF20040P
??? R NgoWSORF2276P (100% identity) GGCC Ngo16691ORF20040P
20070 membrane protein
Type III
ORF Gene Most similar Specificity Name
 
5940 peptidyl-prolyl cis-trans isomerase
5950 M M.NgoWSORF647P (100% identity) CCACC M.Ngo16691ORF5950P
5960 R Ngos1291ORF8455P (100% identity) CCACC Ngo16691ORF5950P
5970 tRNA 2-thiocytidine biosynthesis protein TtcA
 
6900 alpha-hydroxy-acid oxidizing enzyme
6910 R NgoWSORF749P (100% identity) Ngo16691ORF6920P
??? M M.NgoNG290ORF3570P (100% identity) M.Ngo16691ORF6920P
6940 tRNA pseudouridine synthase B