Ref: Hanao,M. et al. unpublished

REBASE ref # 30554

Complete sequence: 2,208,809 bp

GenBank #: AP023073

REBASE acronym: Ngo15753

Org_num: 40731

 

All begin TUM15753C_

Type I
ORF Gene Most similar Specificity Name
 
8850 3,4-dihydroxy-2-butanone-4-phosphate synthase
??? M M.Ngo19853ORF8820P (100% identity) GAGNNNNNTAC M.Ngo15753ORF8860P
8880 280 aa hypothetical protein
8890 186 aa hypothetical protein
8900 S S.NgoWSI (100% identity) GAGNNNNNTAC S.Ngo15753ORF8860P
8910 77 aa hypothetical protein
??? R NgoFQ35ORF5510P (100% identity) GAGNNNNNTAC Ngo15753ORF8860P
8950 ATPase AAA
 
11860 ATP-dependent Clp protease ATP-binding subunit
11870 R Ngo19853ORF11850P (100% identity) GCANNNNNNNGTC Ngo15753ORF11900P
11880 S S.Ngo19853ORF11850P (100% identity) GCANNNNNNNGTC S.Ngo15753ORF11900P
11890 DNA damage-inducible protein D
11900 M M.NgoWSII (100% identity) GCANNNNNNNGTC M.Ngo15753ORF11900P
11910 ADP-L-glycero-D-manno-heptose-6-epimerase
Type II
ORF Gene Most similar Specificity Name
 
60 leucine--tRNA ligase
70 R restriction endonuclease GATC Ngo15753ORF70P
??? M M.NgoWOORF8P (100% identity) M.Ngo15753ORF70P
90 151 aa hypothetical protein
 
3700 IS1595 family transposase
3710 M M.NgoWSORF259P (100% identity) CCGCGG M.Ngo15753ORF3710P
3720 R NgoWSORF259P (100% identity) CCGCGG Ngo15753ORF3710P
3730 UvrABC system protein A
 
4050 pilus assembly protein PilE
??? M M.NgoJH7ORFGP (100% identity) CCGG M.Ngo15753ORF4060P
??? R NgoTFGB2ORF1219P (100% identity) CCGG Ngo15753ORF4060P
4090 V very short patch repair endonuclease V.Ngo15753ORF4060P
4100 replication initiation factor
 
6560 N5-carboxyaminoimidazole ribonucleotide
6570 R NgoFQ01ORF4235P (100% identity) GCCGGC Ngo15753ORF6580P
6580 M M.NgoWLORF1156P (100% identity) GCCGGC M.Ngo15753ORF6580P
6590 anthranilate synthase component 1
 
9160 3-isopropylmalate dehydratase small subunit
9170 M M.Ngo19855ORF7240P (100% identity) GGNNCC M.Ngo15753ORF9170P
9180 R NgoWSORF784P (100% identity) GGNNCC Ngo15753ORF9170P
9190 3-isopropylmalate dehydrogenase
 
12280 115 aa hypothetical protein
12290 M cytosine-specific methyltransferase GCSGC M.Ngo15753ORF12290P
12300 R restriction endonuclease GCSGC Ngo15753ORF12290P
12310 H DEAD/DEAH box helicase H.Ngo15753ORF12290P
12320 uroporphyrinogen decarboxylase
 
12360 140 aa hypothetical protein
12370 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.Ngo15753ORF12380P
12380 RM NgoWSORF450P (100% identity) GACNNNNNTGA Ngo15753ORF12380P
12390 215 aa hypothetical protein
 
12900 phenylalanine--tRNA ligase beta subunit
12910 R NgoWSORF391P (100% identity) Ngo15753ORF12920P
??? M M.NgoWSORF391P (100% identity) M.Ngo15753ORF12920P
12940 V V.NgoWSORF391P (100% identity) V.Ngo15753ORF12920P
12950 phenylalanine--tRNA ligase alpha subunit
 
18300 membrane protein
18310 R NgoWOORF1958P (100% identity) GGCC Ngo15753ORF18320P
18320 M M.NgoWSORF2276P (100% identity) GGCC M.Ngo15753ORF18320P
18330 ribosome-recycling factor
 
19270 58 aa hypothetical protein
19280 R NgoWFIIP (100% identity) GGTGA Ngo15753ORF19290P
19290 M M1.Ngo19853ORF19220P (100% identity) GGTGA M1.Ngo15753ORF19290P
19300 M M1.NgoWSIII (100% identity) GGTGA M2.Ngo15753ORF19290P
19310 RNA-binding protein
 
20230 GTPase Obg
20240 M M.NgoWSORF2052P (100% identity) RGCGCY M.Ngo15753ORF20240P
20250 R NgoWSORF2052P (100% identity) RGCGCY Ngo15753ORF20240P
20260 cysteine--tRNA ligase
Type III
ORF Gene Most similar Specificity Name
 
9480 tRNA pseudouridine synthase B
??? M M.Ngo19853ORF9450P (100% identity) M.Ngo15753ORF9490P
9520 R Ngo19853ORF9450P (100% identity) Ngo15753ORF9490P
9530 alpha-hydroxy-acid oxidizing enzyme
 
10460 tRNA 2-thiocytidine biosynthesis protein TtcA
10470 R Ngo19853ORF10440P (100% identity) CCACC Ngo15753ORF10480P
10480 M M.NgoWSORF647P (100% identity) CCACC M.Ngo15753ORF10480P
10490 peptidyl-prolyl cis-trans isomerase