Neisseria gonorrhoeae TUM19854 |
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Putative Neisseria gonorrhoeae TUM19854 RM systems
Ref: Hanao,M. et al. unpublished
REBASE ref # 30554
Complete sequence: 2,167,602 bp
GenBank #: AP023069
REBASE acronym: Ngo19854
Org_num: 40734
All begin TUM19854C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4500 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 4510 | M | M.Ngos1291ORF7750P (100% identity) | M.Ngo19854ORF4510P | |
| 4520 | DNA damage-inducible protein D | |||
| ??? | S | S.NgoJH16ORFHP (100% identity) | GACNNNNNNNTGC | S1.Ngo19854ORF4510P |
| 4550 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.Ngo19854ORF4510P |
| 4560 | R | NgoWSIIP (100% identity) | Ngo19854ORF4510P | |
| 4570 | ATP-dependent Clp protease ATP-binding subunit | |||
| 7490 | ATPase AAA | |||
| 7500 | R | NgoWSIP (100% identity) | GAGNNNNNTAC | Ngo19854ORF7550P |
| 7510 | 77 aa hypothetical protein | |||
| 7520 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo19854ORF7550P |
| 7530 | 186 aa hypothetical protein | |||
| 7540 | 279 aa hypothetical protein | |||
| 7550 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo19854ORF7550P |
| 7560 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | leucine--tRNA ligase | |||
| 70 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo19854ORF70P |
| ??? | site-specific DNA-methyltransferase | |||
| 70 | restriction endonuclease | |||
| ??? | M | M.NgoWOORF8P (100% identity) | M.Ngo19854ORF80P | |
| 90 | 151 aa hypothetical protein | |||
| 2260 | IS1595 family transposase | |||
| 2270 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo19854ORF2270P |
| 2280 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo19854ORF2270P |
| 2290 | UvrABC system protein A | |||
| 3450 | phenylalanine--tRNA ligase alpha subunit | |||
| 3460 | V | V.NgoWSORF391P (100% identity) | V.Ngo19854ORF3470P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo19854ORF3470P | |
| 3490 | R | NgoWSORF391P (100% identity) | Ngo19854ORF3470P | |
| 3500 | phenylalanine--tRNA ligase beta subunit | |||
| 4020 | 215 aa hypothetical protein | |||
| 4030 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo19854ORF4030P |
| 4040 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo19854ORF4030P |
| 4050 | 140 aa hypothetical protein | |||
| 4090 | uroporphyrinogen decarboxylase | |||
| 4100 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo19854ORF4120P | |
| 4110 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo19854ORF4120P |
| 4120 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo19854ORF4120P |
| 4130 | 75 aa hypothetical protein | |||
| 7240 | 3-isopropylmalate dehydrogenase | |||
| 7250 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo19854ORF7260P |
| 7260 | M | M.Ngo19855ORF7240P (100% identity) | GGNNCC | M.Ngo19854ORF7260P |
| 7270 | 3-isopropylmalate dehydratase small subunit | |||
| 9180 | anthranilate synthase component 1 | |||
| 9190 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo19854ORF9190P |
| 9200 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo19854ORF9190P |
| 9210 | N5-carboxyaminoimidazole ribonucleotide | |||
| 15900 | 449 aa hypothetical protein | |||
| 15910 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo19854ORF15940P | |
| 15920 | 198 aa hypothetical protein | |||
| 15930 | R | 285 aa hypothetical protein | Ngo19854ORF15940P | |
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo19854ORF15940P | |
| 15950 | pilus assembly protein PilE | |||
| 18040 | cysteine--tRNA ligase | |||
| 18050 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo19854ORF18060P |
| 18060 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo19854ORF18060P |
| 18070 | GTPase Obg | |||
| 18980 | RNA-binding protein | |||
| 18990 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo19854ORF18990P |
| 19000 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo19854ORF18990P |
| 19010 | R | NgoWFIIP (100% identity) | GGTGA | Ngo19854ORF18990P |
| 19020 | sodium/glutamate symporter | |||
| 20060 | ribosome-recycling factor | |||
| 20070 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo19854ORF20070P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo19854ORF20070P |
| 20100 | membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5930 | peptidyl-prolyl cis-trans isomerase | |||
| 5940 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo19854ORF5940P |
| 5950 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo19854ORF5940P |
| 5960 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
| 6900 | alpha-hydroxy-acid oxidizing enzyme | |||
| 6910 | R | NgoWSORF749P (100% identity) | Ngo19854ORF6920P | |
| ??? | M | M.NgoNG290ORF3570P (100% identity) | M.Ngo19854ORF6920P | |
| 6940 | tRNA pseudouridine synthase B | |||