Neisseria gonorrhoeae TUM19853 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae TUM19853 RM systems
Ref: Hanao,M. et al. unpublished
REBASE ref # 30554
Complete sequence: 2,209,464 bp
GenBank #: AP023067
REBASE acronym: Ngo19853
Org_num: 40733
All begin TUM19853C_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8810 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | |||
| ??? | M | M.Ngo15753ORF8860P (100% identity) | GAGNNNNNTAC | M.Ngo19853ORF8820P |
| 8840 | 280 aa hypothetical protein | |||
| 8850 | 186 aa hypothetical protein | |||
| 8860 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo19853ORF8820P |
| 8870 | 77 aa hypothetical protein | |||
| ??? | R | NgoFQ35ORF5510P (100% identity) | GAGNNNNNTAC | Ngo19853ORF8820P |
| 8910 | ATPase AAA | |||
| 11810 | ATP-dependent Clp protease ATP-binding subunit | |||
| 11820 | R | Ngo15753ORF11900P (100% identity) | GCANNNNNNNGTC | Ngo19853ORF11850P |
| 11830 | S | S.Ngo9460ORF2075P (100% identity) | GCANNNNNNNGTC | S.Ngo19853ORF11850P |
| 11840 | DNA damage-inducible protein D | |||
| 11850 | M | M.NgoWSII (100% identity) | GCANNNNNNNGTC | M.Ngo19853ORF11850P |
| 11860 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | leucine--tRNA ligase | |||
| 70 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo19853ORF80P |
| ??? | M | M.NgoWOORF8P (100% identity) | M.Ngo19853ORF80P | |
| 90 | 151 aa hypothetical protein | |||
| 3710 | IS1595 family transposase | |||
| 3720 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo19853ORF3720P |
| 3730 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo19853ORF3720P |
| 3740 | UvrABC system protein A | |||
| 4050 | pilus assembly protein PilE | |||
| ??? | M | M.NgoJH7ORFGP (100% identity) | CCGG | M.Ngo19853ORF4060P |
| 4070 | R | 285 aa hypothetical protein | CCGG | Ngo19853ORF4060P |
| 4080 | 198 aa hypothetical protein | |||
| 4090 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo19853ORF4060P | |
| 4100 | replication initiation factor | |||
| 6540 | N5-carboxyaminoimidazole ribonucleotide | |||
| 6550 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | Ngo19853ORF6560P |
| 6560 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo19853ORF6560P |
| 6570 | anthranilate synthase component 1 | |||
| 9120 | 3-isopropylmalate dehydratase small subunit | |||
| 9130 | M | M.Ngo19855ORF7240P (100% identity) | GGNNCC | M.Ngo19853ORF9130P |
| 9140 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo19853ORF9130P |
| 9150 | 3-isopropylmalate dehydrogenase | |||
| 12230 | 85 aa hypothetical protein | |||
| 12240 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo19853ORF12240P |
| 12250 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo19853ORF12240P |
| 12260 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo19853ORF12240P | |
| 12270 | uroporphyrinogen decarboxylase | |||
| 12310 | 140 aa hypothetical protein | |||
| 12320 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo19853ORF12330P |
| 12330 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo19853ORF12330P |
| 12340 | 215 aa hypothetical protein | |||
| 12850 | phenylalanine--tRNA ligase beta subunit | |||
| 12860 | R | NgoWSORF391P (100% identity) | Ngo19853ORF12870P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo19853ORF12870P | |
| 12890 | V | V.NgoWSORF391P (100% identity) | V.Ngo19853ORF12870P | |
| 12900 | phenylalanine--tRNA ligase alpha subunit | |||
| 18230 | membrane protein | |||
| 18240 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo19853ORF18250P |
| 18250 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo19853ORF18250P |
| 18260 | ribosome-recycling factor | |||
| 19200 | 58 aa hypothetical protein | |||
| 19210 | R | NgoWFIIP (100% identity) | GGTGA | Ngo19853ORF19220P |
| 19220 | M | M1.Ngo15753ORF19290P (100% identity) | GGTGA | M1.Ngo19853ORF19220P |
| 19230 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo19853ORF19220P |
| 19240 | RNA-binding protein | |||
| 20160 | GTPase Obg | |||
| 20170 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo19853ORF20170P |
| 20180 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo19853ORF20170P |
| 20190 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9440 | tRNA pseudouridine synthase B | |||
| ??? | M | M.Ngo15753ORF9490P (100% identity) | M.Ngo19853ORF9450P | |
| 9480 | R | Ngo15753ORF9490P (100% identity) | Ngo19853ORF9450P | |
| 9490 | alpha-hydroxy-acid oxidizing enzyme | |||
| 10420 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
| 10430 | R | Ngo15753ORF10480P (100% identity) | CCACC | Ngo19853ORF10440P |
| 10440 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo19853ORF10440P |
| 10450 | peptidyl-prolyl cis-trans isomerase | |||