Escherichia coli SCU-486 |
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Putative Escherichia coli SCU-486 RM systems
Ref: Stephens,C. et al. unpublished
REBASE ref # 30306
Complete sequence: 5,198,439 bp
GenBank #: CP051749
REBASE acronym: EcoSCU486
Org_num: 40079
All begin HHJ55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21215 | restriction endonuclease | |||
| 21220 | M | M.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | M.EcoSCU486ORF21220P |
| 21225 | S | S.Ecost88ORF20845P (98% identity) | GGYANNNNNGTNG | S.EcoSCU486ORF21220P |
| 21230 | R | Ecost88ORF20845P (99% identity) | GGYANNNNNGTNG | EcoSCU486ORF21220P |
| 21235 | endoribonuclease SymE | |||
| 22725 | AAA family ATPase | |||
| 22730 | S | S.SspZ54ORF5015P (98% identity) | TGANNNNNNCTTC | S.EcoSCU486ORF22735P |
| 22735 | M | M.SspZ54ORF5015P (71% identity) | TGANNNNNNCTTC | M.EcoSCU486ORF22735P |
| 22740 | maltose transporter permease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3220 | tyrosine-type recombinase/integrase | |||
| 3225 | M | M.EcoT040ORF14860P (89% identity) | M.EcoSCU486ORF3225P | |
| 3230 | 182 aa hypothetical protein | |||
| 7110 | DNA-binding transcriptional regulator Fis | |||
| 7115 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoSCU486ORF7115P |
| 7120 | DUF2556 family protein | |||
| 7645 | ribulose-phosphate 3-epimerase | |||
| 7650 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSCU486DamP |
| 7655 | cell division protein DamX | |||
| 9820 | phosphohydrolase | |||
| 9825 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.EcoSCU486DcmP |
| 9830 | V | V.SflFF64DcmP (100% identity) | V.EcoSCU486DcmP | |
| 9835 | drug/metabolite exporter YedA | |||
| 13200 | 85 aa hypothetical protein | |||
| 13205 | R | EcosEC21ORF11865P (100% identity) | EcoSCU486ORF13210P | |
| ??? | M | M.EcoS1268ORF11970P (92% identity) | M.EcoSCU486ORF13210P | |
| 13225 | 71 aa hypothetical protein | |||
| 19205 | toxin | |||
| 19210 | M | M.Ecos32ORF15460P (100% identity) | M.EcoSCU486ORF19210P | |
| 19215 | R | Ecos32ORF15460P (100% identity) | EcoSCU486ORF19210P | |
| 19225 | glutamate-5-semialdehyde dehydrogenase | |||
| 21000 | LexA family transcriptional regulator | |||
| 21005 | M | M.Ecos67ORF20055P (100% identity) | GATC | M.EcoSCU486ORF21005P |
| 21010 | PerC family transcriptional regulator | |||