Campylobacter species CFSAN093227 |
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Putative Campylobacter species CFSAN093227 RM systems
Ref: Gonzalez-Escalona,N. et al. unpublished
REBASE ref # 30379
Complete sequence: 1,824,459 bp
GenBank #: CP040610
REBASE acronym: Csp93227
Org_num: 40253
All begin FBF06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8590 | NAD(P)-dependent alcohol dehydrogenase | |||
| 8595 | R | Cje5154ORF780P (99% identity) | CTANNNNNNNNTAYC | Csp93227ORF8615P |
| 8600 | DUF262 domain-containing protein | |||
| 8605 | S | S.Csp93257ORF8150P (100% identity) | CTANNNNNNNNTAYC | S.Csp93227ORF8615P |
| 8610 | Fic family protein | |||
| 8615 | M | M.CjeZP3204ORF8445P (99% identity) | CTANNNNNNNNTAYC | M.Csp93227ORF8615P |
| 8620 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 170 | 399 aa hypothetical protein | |||
| 175 | RM | CjeG1ORF175P (99% identity) | Csp93227ORF175P | |
| 180 | 397 aa hypothetical protein | |||
| 1030 | translation initiation factor IF-3 | |||
| 1035 | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.Csp93227ORF1035P |
| 1040 | 102 aa hypothetical protein | |||
| 3695 | acetate kinase | |||
| 3700 | RM | CjeZP3204ORF3775P (100% identity) | GKAAYG | Csp93227ORF3700P |
| 3705 | 163 aa hypothetical protein | |||
| 3860 | 95 aa hypothetical protein | |||
| 3865 | M | M.Csp93257ORF3680P (100% identity) | M.Csp93227ORF3865P | |
| 3870 | virion morphogenesis protein | |||
| 6170 | NAD-dependent deacetylase | |||
| 6175 | RM | Cje5128ORF4800P (99% identity) | Csp93227ORF6175P | |
| 6180 | endonuclease MutS2 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1380 | lipid-A-disaccharide synthase | |||
| 1385 | R | Csp93256ORF1410P (100% identity) | Csp93227ORF1395P | |
| 1390 | 245 aa hypothetical protein | |||
| 1395 | M | M.Csp93256ORF1410P (100% identity) | M.Csp93227ORF1395P | |
| 1400 | lipid-A-disaccharide synthase | |||
| 3415 | hydrogenase maturation nickel metallochaperone | |||
| 3420 | M | M.Cje65413ORF8300P (100% identity) | M.Csp93227ORF3420P | |
| 3425 | R | Csp6468ORF3335P (100% identity) | Csp93227ORF3420P | |
| 3430 | 321 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 695 | ribosome maturation factor RimP | |||
| 700 | R | CjeA14aMcrBP (98% identity) | Csp93227McrBP | |
| 705 | R | CjeCJ075McrCP (100% identity) | Csp93227McrCP | |
| 710 | metal ABC transporter permease | |||