Campylobacter species CFSAN093241 |
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Putative Campylobacter species CFSAN093241 RM systems
Ref: Gonzalez-Escalona,N. et al. unpublished
REBASE ref # 30379
Complete sequence: 1,662,100 bp
GenBank #: CP040612
REBASE acronym: Csp93241
Org_num: 40255
All begin FBE96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7585 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7590 | R | Cje4456ORF1385P (99% identity) | CTANNNNNNNNTAYC | Csp93241ORF7610P |
| 7595 | 1014 aa hypothetical protein | |||
| 7600 | S | S.CjeF38011II (99% identity) | CTANNNNNNNNTAYC | S.Csp93241ORF7610P |
| 7605 | Fic family protein | |||
| 7610 | M | M.CjeR72ORF7470P (100% identity) | CTANNNNNNNNTAYC | M.Csp93241ORF7610P |
| 7615 | carboxymuconolactone decarboxylase | |||
| 8470 | 153 aa hypothetical protein | |||
| 8475 | M | M.Csp93256ORF8455P (100% identity) | ACCNNNNNRTC | M.Csp93241ORF8475P |
| 8480 | anticodon nuclease | |||
| 8485 | S | S.Csp93256ORF8455P (100% identity) | ACCNNNNNRTC | S.Csp93241ORF8475P |
| 8490 | R | Csp93256ORF8455P (100% identity) | ACCNNNNNRTC | Csp93241ORF8475P |
| 8495 | 64 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 175 | 465 aa hypothetical protein | |||
| 180 | RM | Cje1597ORF185P (99% identity) | Csp93241ORF180P | |
| 185 | pentapeptide repeat-containing protein | |||
| 1040 | translation initiation factor IF-3 | |||
| 1045 | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.Csp93241ORF1045P |
| 1050 | 106 aa hypothetical protein | |||
| 3425 | acetate kinase | |||
| 3430 | RM | Cje65340ORF4595P (100% identity) | GKAAGC | Csp93241ORF3430P |
| 3435 | 163 aa hypothetical protein | |||
| 5195 | NAD-dependent protein deacylase | |||
| 5200 | RM | Csp93256ORF5185P (99% identity) | GAGNNNNNRTG | Csp93241ORF5200P |
| 5205 | endonuclease MutS2 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1395 | lipid-A-disaccharide synthase | |||
| 1400 | R | Csp93256ORF1410P (100% identity) | Csp93241ORF1410P | |
| 1405 | 245 aa hypothetical protein | |||
| 1410 | M | M.Csp93256ORF1410P (100% identity) | M.Csp93241ORF1410P | |
| 1415 | lipid-A-disaccharide synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 695 | ribosome maturation factor RimP | |||
| 700 | R | Csp93259McrBP (100% identity) | Csp93241McrBP | |
| 705 | R | Csp93259McrCP (100% identity) | Csp93241McrCP | |
| 710 | metal ABC transporter permease | |||