Campylobacter species CFSAN093246 |
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Putative Campylobacter species CFSAN093246 RM systems
Ref: Gonzalez-Escalona,N. et al. unpublished
REBASE ref # 30379
Complete sequence: 1,680,823 bp
GenBank #: CP040613
REBASE acronym: Csp93246
Org_num: 40256
All begin FBE87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7875 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7880 | R | Csp78ORF8120P (100% identity) | GRTANNNNNNNNTTRG | Csp93246ORF7905P |
| 7885 | ATP-binding protein | |||
| 7890 | RloB domain-containing protein | |||
| 7895 | S | S.Csp78ORF8120P (98% identity) | GRTANNNNNNNNTTRG | S.Csp93246ORF7905P |
| 7900 | Fic family protein | |||
| 7905 | M | M.Csp93257ORF8150P (100% identity) | GRTANNNNNNNNTTRG | M.Csp93246ORF7905P |
| 7910 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 175 | 464 aa hypothetical protein | |||
| 180 | RM | Csp78ORF180P (100% identity) | Csp93246ORF180P | |
| 185 | ATP-binding protein | |||
| 1045 | translation initiation factor IF-3 | |||
| 1050 | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.Csp93246ORF1050P |
| 1055 | 106 aa hypothetical protein | |||
| 3395 | acetate kinase | |||
| 3400 | RM | Csp78ORF3355P (100% identity) | GKAAGC | Csp93246ORF3400P |
| 3405 | 163 aa hypothetical protein | |||
| 5165 | NAD-dependent deacetylase | |||
| 5170 | RM | Csp93257ORF5700P (100% identity) | CCANNNNNNGT | Csp93246ORF5170P |
| 5175 | endonuclease MutS2 | |||
| 5885 | virion morphogenesis protein | |||
| 5890 | M | M.Csp93257ORF3680P (100% identity) | M.Csp93246ORF5890P | |
| 5895 | 95 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 700 | ribosome maturation factor RimP | |||
| 705 | R | Csp93257McrBP (99% identity) | Csp93246McrBP | |
| 710 | R | Csp93257McrCP (100% identity) | Csp93246McrCP | |
| 715 | metal ABC transporter permease | |||