Campylobacter species CFSAN093256 |
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Putative Campylobacter species CFSAN093256 RM systems
Ref: Gonzalez-Escalona,N. et al. unpublished
REBASE ref # 30379
Complete sequence: 1,653,603 bp
GenBank #: CP040615
REBASE acronym: Csp93256
Org_num: 40257
All begin FBF19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7565 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7570 | R | Cje65340ORF6765P (100% identity) | GRTANNNNNNNNTTRG | Csp93256ORF7590P |
| 7575 | RloC protein | |||
| 7580 | S | S.CjeR14ORF9050P (100% identity) | GRTANNNNNNNNTTRG | S.Csp93256ORF7590P |
| 7585 | Fic family protein | |||
| 7590 | M | M.Cje65340ORF6765P (100% identity) | GRTANNNNNNNNTTRG | M.Csp93256ORF7590P |
| 7595 | carboxymuconolactone decarboxylase family | |||
| 8450 | 153 aa hypothetical protein | |||
| 8455 | M | M.Csp93241ORF8475P (100% identity) | ACCNNNNNRTC | M.Csp93256ORF8455P |
| 8460 | anticodon nuclease | |||
| 8465 | S | S.Csp93241ORF8475P (100% identity) | ACCNNNNNRTC | S.Csp93256ORF8455P |
| 8470 | R | Csp93241ORF8475P (100% identity) | ACCNNNNNRTC | Csp93256ORF8455P |
| 8475 | 64 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 175 | 465 aa hypothetical protein | |||
| 180 | RM | Cje14430ORF175P (99% identity) | Csp93256ORF180P | |
| 185 | 584 aa hypothetical protein | |||
| 1035 | translation initiation factor IF-3 | |||
| 1040 | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.Csp93256ORF1040P |
| 1045 | 106 aa hypothetical protein | |||
| 3415 | acetate kinase | |||
| 3420 | RM | Cje65401ORF260P (100% identity) | GKAAYG | Csp93256ORF3420P |
| 3425 | 163 aa hypothetical protein | |||
| 5180 | NAD-dependent protein deacylase | |||
| 5185 | RM | CjeYH1ORF1124P (100% identity) | GAGNNNNNRTG | Csp93256ORF5185P |
| 5190 | endonuclease MutS2 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1395 | lipid-A-disaccharide synthase | |||
| 1400 | R | Csp93241ORF1410P (100% identity) | Csp93256ORF1410P | |
| 1405 | 245 aa hypothetical protein | |||
| 1410 | M | M.Csp93241ORF1410P (100% identity) | M.Csp93256ORF1410P | |
| 1415 | lipid-A-disaccharide synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 690 | ribosome maturation factor RimP | |||
| 695 | R | CjeD4860McrBP (100% identity) | Csp93256McrBP | |
| 700 | R | Csp93259McrCP (100% identity) | Csp93256McrCP | |
| 705 | metal ABC transporter permease | |||