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Putative Avibacterium paragallinarum ADL-AP15 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 30286
Complete sequence: 2,415,950 bp
GenBank #: CP051638
REBASE acronym: ApaAP15
Org_num: 39973
All begin HHJ60_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
9125 | site-specific integrase | |||
9130 | S | S1.ApaAP17ORF9105P (100% identity) | S1.ApaAP15ORF9135P | |
9135 | M | M.ApaESV135ORF11005P (100% identity) | M.ApaAP15ORF9135P | |
9140 | S | S2.ApaAP17ORF9105P (100% identity) | S2.ApaAP15ORF9135P | |
9145 | S | S1.ApaESV135ORF11005P (100% identity) | S3.ApaAP15ORF9135P | |
9150 | MFS transporter | |||
10775 | DUF927 domain-containing protein | |||
10780 | R | ApaAP17ORF10770P (100% identity) | ApaAP15ORF10800P | |
10785 | MFS transporter | |||
10790 | 308 aa hypothetical protein | |||
10795 | S | S.ApaESV135ORF11455P (100% identity) | S.ApaAP15ORF10800P | |
10800 | M | M.ApaESV135ORF11455P (98% identity) | M.ApaAP15ORF10800P | |
10805 | 197 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
540 | phosphoglycerate dehydrogenase | |||
545 | RM | ApaESV135ORF8505P (100% identity) | ApaAP15ORF545P | |
550 | endolytic transglycosylase MltG | |||
4165 | ArsC family reductase | |||
4170 | M | M2.ApaESV135ORF3980P (100% identity) | M1.ApaAP15ORF4170P | |
4175 | R | ApasMORFGP (100% identity) | ApaAP15ORF4170P | |
4180 | M | M1.ApaESV135ORF3980P (100% identity) | M2.ApaAP15ORF4170P | |
4185 | threonine synthase | |||
6540 | valine--tRNA ligase | |||
6545 | R | ApaESV135ORF2500P (100% identity) | ApaAP15ORF6550P | |
??? | M | M.ApaESV135ORF2500P (100% identity) | M.ApaAP15ORF6550P | |
6555 | 159 aa hypothetical protein | |||
6885 | DUF1367 family protein | |||
6890 | M | M.ApaESV135ORF2155P (100% identity) | M.ApaAP15ORF6890P | |
6895 | ATP-binding protein | |||
7035 | 94 aa hypothetical protein | |||
7040 | M | M.ApaESV135ORF2010P (100% identity) | M.ApaAP15ORF7040P | |
7045 | SAM-dependent DNA methyltransferase | |||
7045 | SAM-dependent DNA methyltransferase | |||
7050 | M | M1.ApaESV135ORF2000P (100% identity) | M2.ApaAP15ORF7045P | |
7055 | 287 aa hypothetical protein | |||
10995 | helix-turn-helix domain-containing protein | |||
11000 | M | M1.ApaESV135ORF11650P (100% identity) | M1.ApaAP15ORF11000P | |
11005 | M | M2.ApaESV135ORF11650P (100% identity) | M2.ApaAP15ORF11000P | |
11010 | RM | ApaESV135ORF11650P (100% identity) | ApaAP15ORF11000P | |
11015 | 30S ribosomal protein S12 methylthiotransferase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
4325 | IS3 family transposase | |||
4330 | R | ApaESV135ORF3825P (100% identity) | ApaAP15ORF4335P | |
4335 | M | M1.ApaAP10ORF4325P (100% identity) | M1.ApaAP15ORF4335P | |
4340 | M | M.ApaESV135ORF3825P (39% identity) | M2.ApaAP15ORF4335P | |
4345 | LysR family transcriptional regulator | |||
9080 | aminoacyl-histidine dipeptidase | |||
9085 | R | ApaESV135ORF11050P (100% identity) | ApaAP15ORF9090P | |
9090 | M | M.ApaESV135ORF11050P (100% identity) | M.ApaAP15ORF9090P | |
9095 | 105 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
1680 | 3-dehydroquinate synthase | |||
??? | M | M.ApaESV135ORF7360P (100% identity) | M.ApaAP15ORF1685P | |
1690 | DUF721 domain-containing protein |