Escherichia coli SCZE5 |
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Putative Escherichia coli SCZE5 RM systems
Ref: He,J. unpublished
REBASE ref # 30307
Complete sequence: 4,834,675 bp
GenBank #: CP051222
REBASE acronym: EcoSCZE5
Org_num: 40080
All begin HF562_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14395 | transcription factor | |||
| 14400 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.EcoSCZE5ORF14400P |
| 14405 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.EcoSCZE5ORF14400P |
| 14410 | DUF4433 domain-containing protein | |||
| 14415 | macro domain-containing protein | |||
| 14420 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | EcoSCZE5ORF14400P |
| 14425 | M48 family metallopeptidase | |||
| 19925 | DUF262 domain-containing protein | |||
| 19930 | R | EcoXH993ORF23720P (100% identity) | EcoSCZE5ORF19935P | |
| 19935 | M | M.EcoZ503ORFCP (100% identity) | M.EcoSCZE5ORF19935P | |
| 19940 | S | S.Ecoa005ORF2260P (100% identity) | S.EcoSCZE5ORF19935P | |
| 19945 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1730 | cell division protein DamX | |||
| 1735 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSCZE5DamP |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2355 | DUF2556 family protein | |||
| 2360 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoSCZE5ORF2360P |
| 2365 | DNA-binding transcriptional regulator Fis | |||
| 6725 | DUF1382 family protein | |||
| 6730 | M | M.EcoCRH7ORF6480P (100% identity) | M.EcoSCZE5ORF6730P | |
| 6735 | PerC family transcriptional regulator | |||
| 9670 | HD domain-containing protein | |||
| 9675 | M | M.EcoXH993DcmP (100% identity) | CCWGG | M.EcoSCZE5DcmP |
| 9680 | V | V.SflSTLE3DcmP (100% identity) | V.EcoSCZE5DcmP | |
| 9685 | drug/metabolite exporter YedA | |||
| 20120 | HNH endonuclease | |||
| 20125 | R | R1.EcoXH993ORF23960P (100% identity) | EcoSCZE5ORF20125P | |
| 20130 | DNA cytosine methyltransferase | |||
| 20125 | HNH endonuclease | |||
| 20130 | M | M.EcoXH993ORF23960P (100% identity) | M.EcoSCZE5ORF20130P | |
| 20135 | R | R2.EcoXH993ORF23960P (98% identity) | EcoSCZE5ORF20130P | |
| 20140 | transposase | |||