Lactococcus raffinolactis Lr_19_14 |
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Putative Lactococcus raffinolactis Lr_19_14 RM systems
Ref: Ybazeta,G. et al. unpublished
REBASE ref # 30506
| Sequence length: | GenBank #: | |
| Chromosome: | 2,368,909 bp | CP047628 |
| plasmid pLraf_19_14_1: | 20,558 bp | CP047629 |
REBASE acronym: Lra1914
Org_num: 40620
All begin GU334_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6540 | tyrosine-type recombinase/integrase | |||
| 6545 | R | Lra12SORF6470P (85% identity) | Lra1914ORF6565P | |
| 6550 | S | S1.JspT32ORF150P (29% identity) | S2.Lra1914ORF6565P | |
| 6555 | AAA family ATPase | |||
| 6560 | S | S1.Lra12SORF6470P (59% identity) | S1.Lra1914ORF6565P | |
| 6565 | M | M.Lra12SORF6470P (98% identity) | M.Lra1914ORF6565P | |
| 6570 | elongation factor 4 | |||
| 11475 | IS982 family transposase | |||
| 11480 | R | Lra68IIP (99% identity) | Lra1914ORF11485P | |
| 11485 | M | M.LlaA12ORF1723P (99% identity) | M.Lra1914ORF11485P | |
| 11490 | S | S.LlaB26V (63% identity) | S.Lra1914ORF11485P | |
| 11495 | oleate hydratase | |||
| plasmid pLraf_19_14_1 | ||||
| 11685 | DNA-binding protein | |||
| 11690 | RM | LlaO184I (87% identity) | Lra1914ORF11690P | |
| 11695 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5075 | 62 aa hypothetical protein | |||
| 5080 | M | M.Lra197ORF5660P (96% identity) | M.Lra1914ORF5080P | |
| 5085 | 127 aa hypothetical protein | |||
| 5515 | 133 aa hypothetical protein | |||
| 5520 | M | M.Lra12SORF5690P (99% identity) | M.Lra1914ORF5520P | |
| 5525 | antirestriction protein ArdA | |||
| 7800 | prenyltransferase | |||
| 7805 | R | Lra194SORF2275P (100% identity) | Lra1914ORF7810P | |
| 7810 | M | M.Lra194SORF2275P (100% identity) | M.Lra1914ORF7810P | |
| 7815 | 113 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9670 | IS5/IS1182 family transposase | |||
| 9675 | R | Lra195McrCP (98% identity) | Lra1914McrCP | |
| 9680 | R | Lra195McrBP (99% identity) | Lra1914McrBP | |
| 9685 | IS3 family transposase | |||