Lactococcus raffinolactis Lr_19_5 |
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Putative Lactococcus raffinolactis Lr_19_5 RM systems
Ref: Ybazeta,G. et al. unpublished
REBASE ref # 30506
| Sequence length: | GenBank #: | |
| Chromosome: | 2,543,729 bp | CP047616 |
| plasmid pLraf_19_5_1: | 82,612 bp | CP047617 |
REBASE acronym: Lra195
Org_num: 40622
All begin GU336_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 525 | 104 aa hypothetical protein | |||
| 530 | S | S.Lla895ORF495P (40% identity) | S.Lra195ORF535P | |
| 535 | M | M.Lra195ORF12830P (57% identity) | M.Lra195ORF535P | |
| 540 | 273 aa hypothetical protein | |||
| 10640 | 67 aa hypothetical protein | |||
| 10645 | R | LlaSD96ORF1906P (99% identity) | Lra195ORF10670P | |
| 10650 | molecular chaperone Tir | |||
| 10655 | 277 aa hypothetical protein | |||
| 10660 | S | S1.LlaA12ORF1262P (48% identity) | S2.Lra195ORF10670P | |
| 10665 | S | S1.Lla073II (45% identity) | S1.Lra195ORF10670P | |
| 10670 | M | M2.LlaA12ORF1262P (99% identity) | M.Lra195ORF10670P | |
| 10675 | IS6-like element ISS1N family transposase | |||
| 12115 | 67 aa hypothetical protein | |||
| 12120 | S | S.Lba1992II (63% identity) | S.Lra195ORF12125P | |
| 12125 | M | M.Lra195ORF12830P (99% identity) | M.Lra195ORF12125P | |
| 12130 | R | Lra195ORF12830P (99% identity) | Lra195ORF12125P | |
| 12135 | 122 aa hypothetical protein | |||
| plasmid pLraf_19_5_1 | ||||
| 12820 | IS6-like element ISS1N family transposase | |||
| 12825 | S | S.Lbr15fORF11285P (62% identity) | S.Lra195ORF12830P | |
| 12830 | M | M.Lra195ORF12125P (99% identity) | M.Lra195ORF12830P | |
| 12835 | R | Lra195ORF12125P (99% identity) | Lra195ORF12830P | |
| 12840 | 122 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4510 | phosphoglycerate dehydrogenase | |||
| 4515 | M | M.Lra194SORF6320P (96% identity) | M.Lra195ORF4515P | |
| 4520 | RM | Lra194SORF6320P (84% identity) | Lra195ORF4515P | |
| 4525 | 199 aa hypothetical protein | |||
| 5915 | 72 aa hypothetical protein | |||
| 5920 | M | M.Lra12SORF5690P (85% identity) | M.Lra195ORF5920P | |
| 5925 | 133 aa hypothetical protein | |||
| 9275 | 133 aa hypothetical protein | |||
| 9280 | M | M.Lra12SORF5690P (97% identity) | M.Lra195ORF9280P | |
| 9285 | antirestriction protein ArdA | |||
| 9475 | IS30 family transposase | |||
| 9480 | M | M.LlaZZ2ORF8205P (74% identity) | M.Lra195ORF9480P | |
| 9485 | LytR family transcriptional regulator | |||
| 11185 | DEAD/DEAH box helicase family protein | |||
| 11190 | RM | LgaTac2ORFAP (69% identity) | Lra195ORF11190P | |
| 11195 | 50S ribosomal protein L33 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2265 | MFS transporter | |||
| 2270 | R | Lpi21615ORF115P (99% identity) | Lra195ORF2275P | |
| 2275 | M | M.Lpi21615ORF115P (100% identity) | M.Lra195ORF2275P | |
| 2280 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10695 | 121 aa hypothetical protein | |||
| 10700 | R | Lra1914McrCP (98% identity) | Lra195McrCP | |
| 10705 | R | Lra1914McrBP (99% identity) | Lra195McrBP | |
| 10710 | 153 aa hypothetical protein | |||