Pasteurellaceae bacterium RH1A |
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Putative Pasteurellaceae bacterium RH1A RM systems
Ref: Hansen,M.J. et al. unpublished
REBASE ref # 29904
Complete sequence: 2,314,446 bp
GenBank #: CP015195
REBASE acronym: PbaRH1A
Org_num: 40763
All begin A4G20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3455 | fumarate reductase | |||
| 3460 | R | AplM62ORF7585P (78% identity) | PbaRH1AORF3470P | |
| 3465 | transcriptional regulator | |||
| 3470 | M | M.Age22229ORF7560P (91% identity) | M.PbaRH1AORF3470P | |
| 3475 | S | S1.AplS1536ORF7750P (76% identity) | S1.PbaRH1AORF3470P | |
| 3480 | integrase | |||
| 3485 | S | S1.Apl273ORF7555P (42% identity) | S2.PbaRH1AORF3470P | |
| 3490 | nuclease | |||
| 6695 | tRNA adenosine(34) deaminase TadA | |||
| 6700 | R | McaRH4ORF616P (65% identity) | PbaRH1AORF6730P | |
| 6705 | 74 aa hypothetical protein | |||
| 6710 | 162 aa hypothetical protein | |||
| 6715 | 84 aa hypothetical protein | |||
| 6720 | 92 aa hypothetical protein | |||
| 6725 | S | S.Hpa33ORF7204P (50% identity) | S.PbaRH1AORF6730P | |
| 6730 | M | M.Pat1ORFEP (73% identity) | M.PbaRH1AORF6730P | |
| 6735 | elongation factor P | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4460 | threonine--tRNA ligase | |||
| 4465 | M | M.Gpad76ORF10080P (82% identity) | M.PbaRH1AORF4465P | |
| 4470 | R | Aeq3874ORF2820P (78% identity) | PbaRH1AORF4465P | |
| 4475 | methionine--tRNA ligase | |||
| 5725 | enoyl-CoA hydratase | |||
| 5730 | M | M.Pba12565ORF10370P (80% identity) | M.PbaRH1AORF5730P | |
| 5735 | 187 aa hypothetical protein | |||
| 6920 | ABC transporter permease | |||
| 6925 | RM | PbaD4ORF867P (57% identity) | PbaRH1AORF6935P | |
| 6930 | M | M2.Mov11969ORF1074P (71% identity) | M2.PbaRH1AORF6935P | |
| 6935 | M | M1.McaZORF1814P (54% identity) | M1.PbaRH1AORF6935P | |
| 6940 | 155 aa hypothetical protein | |||
| 9110 | transporter | |||
| 9115 | M | M.Fca21ORF9805P (68% identity) | M.PbaRH1AORF9115P | |
| 9120 | 3-dehydroquinate synthase | |||
| 9280 | 257 aa hypothetical protein | |||
| 9285 | M | M.LspB1ORFBP (70% identity) | M.PbaRH1AORF9285P | |
| 9290 | 289 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6320 | ATP-dependent helicase | |||
| 6325 | R | Hpa10671ORF1401P (45% identity) | PbaRH1AORF6330P | |
| 6330 | M | M.Hin21384ORF4015P (58% identity) | M.PbaRH1AORF6330P | |
| 6335 | tRNA pseudouridine(55) synthase TruB | |||