Salmonella enterica subsp. enterica serovar Indiana SI102 |
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Putative Salmonella enterica subsp. enterica serovar Indiana SI102 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,740,209 bp | CP050771 |
| plasmid pSI102-1: | 199,036 bp | CP050772 |
REBASE acronym: SenSI102
Org_num: 41087
All begin HEC79_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.StyTDamP (100% identity) | GATC | M.SenSI102DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenSI102ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 3150 | DUF3850 domain-containing protein | |||
| 3155 | M | M.SspZ54ORF6040P (100% identity) | M.SenSI102ORF3155P | |
| 3160 | replication endonuclease | |||
| 9220 | phosphohydrolase | |||
| 9225 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSI102DcmP |
| 9230 | V | V.Sensp14178DcmP (100% identity) | V.SenSI102DcmP | |
| 9235 | drug/metabolite exporter YedA | |||
| 17505 | DUF1317 family protein | |||
| 17510 | M | M.Sensp14152ORF18590P (100% identity) | M.SenSI102ORF17510P | |
| 17515 | 74 aa hypothetical protein | |||
| 19705 | YebC/PmpR family DNA-binding transcriptional | |||
| 19710 | R | Sensp14178ORF19855P (100% identity) | SenSI102ORF19710P | |
| 19715 | 347 aa hypothetical protein | |||
| 19750 | RNA polymerase subunit sigma | |||
| 19755 | R | Sens733ORF18925P (100% identity) | SenSI102ORF19755P | |
| 19760 | malate transporter | |||
| plasmid pSI102-1 | ||||
| 23330 | 55 aa hypothetical protein | |||
| 23335 | M | M.YpsF1ORFCP (100% identity) | M.SenSI102ORF23335P | |
| 23340 | thermonuclease family protein | |||
| 23740 | 48 aa hypothetical protein | |||
| 23745 | M | M.YpsF1ORFBP (100% identity) | M.SenSI102ORF23745P | |
| 23750 | 202 aa hypothetical protein | |||
| 23875 | DNA-binding protein | |||
| 23880 | M | M.YpsF1ORFDP (100% identity) | M.SenSI102ORF23880P | |
| 23885 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17070 | 33 aa hypothetical protein | |||
| 17075 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenSI102ORF17080P |
| 17080 | M | M.Sensp14178ORF17290P (100% identity) | CAGAG | M.SenSI102ORF17080P |
| 17085 | MFS transporter | |||
| 19780 | S8 family peptidase | |||
| 19785 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenSI102ORF19785P |
| 19790 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenSI102ORF19785P |
| 19795 | integrase arm-type DNA-binding domain-containing | |||