Salmonella enterica subsp. enterica serovar Indiana SI174 |
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Putative Salmonella enterica subsp. enterica serovar Indiana SI174 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
Complete sequence: 4,929,169 bp
GenBank #: CP050756
REBASE acronym: SenSI174
Org_num: 41093
All begin HEC85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4370 | transposase | |||
| 4375 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | SenSI174ORF4380P |
| 4380 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.SenSI174ORF4380P |
| 4385 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.SenSI174ORF4380P |
| 4390 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1740 | cell division protein DamX | |||
| 1745 | M | M.StyTDamP (100% identity) | GATC | M.SenSI174DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.SenSI174ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 3150 | DUF3850 domain-containing protein | |||
| 3155 | M | M.SspZ54ORF6040P (100% identity) | M.SenSI174ORF3155P | |
| 3160 | replication endonuclease | |||
| 3520 | DEAD/DEAH box helicase | |||
| 3525 | RM | SflLIN17ORF3140P (100% identity) | SenSI174ORF3525P | |
| 3530 | IS110 family transposase | |||
| 9930 | phosphohydrolase | |||
| 9935 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSI174DcmP |
| 9940 | V | V.Sensp14178DcmP (100% identity) | V.SenSI174DcmP | |
| 9945 | drug/metabolite exporter YedA | |||
| 20420 | YebC/PmpR family DNA-binding transcriptional | |||
| 20425 | R | Sensp14178ORF19855P (100% identity) | SenSI174ORF20425P | |
| 20430 | IS1380-like element ISEc9 family transposase | |||
| 20470 | RNA polymerase subunit sigma | |||
| 20475 | R | Sens733ORF18925P (100% identity) | SenSI174ORF20475P | |
| 20480 | malate transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17805 | 33 aa hypothetical protein | |||
| 17810 | R | Sensp14154ORF17330P (100% identity) | CAGAG | SenSI174ORF17820P |
| 17815 | IS1 family transposase | |||
| 17820 | M | M.Sensp14152ORF17835P (100% identity) | CAGAG | M.SenSI174ORF17820P |
| 17825 | MFS transporter | |||
| 20500 | S8 family peptidase | |||
| 20505 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.SenSI174ORF20505P |
| 20510 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | SenSI174ORF20505P |
| 20515 | integrase arm-type DNA-binding domain-containing | |||