Thiobacillus denitrificans ATCC 25259 |
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Putative Thiobacillus denitrificans ATCC 25259 RM systems
Ref: Beller,H.R. et al. J. Bacteriol. 188 (4), 1473-1488 (2006)
REBASE ref # 9320
Complete sequence: 2,909,809 bp
GenBank #: CP000116 (NC_007404)
REBASE acronym: TdeD
Org_num: 4169
All begin Tbd_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2679 | 190 aa hypothetical protein | |||
| 2680 | M | M.PglR39ORFDP (85% identity) | GCAYNNNNNNCATC | M.TdeDI |
| 2681 | Predicted transcriptional regulator | |||
| 2682 | S | S.KvuY25ORF2897P (60% identity) | GCAYNNNNNNCATC | S.TdeDI |
| 2683 | 478 aa conserved hypothetical protein | |||
| 2684 | HNH nuclease | |||
| 2685 | R | PglR39ORFDP (85% identity) | GCAYNNNNNNCATC | TdeDIP |
| 2686 | acetylglutamate kinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 924 | 3-oxoacyl-(acyl-carrier protein) reductase | |||
| 925 | RM | RbaJ1ORF13310P (62% identity) | TdeDORF925P | |
| 926 | 216 aa hypothetical protein | |||
| 1809 | 67 aa conserved hypothetical protein | |||
| 1810 | M | M.Sma27ORF26140P (86% identity) | M.TdeDORF1810P | |
| 1811 | R | BokCORFAP (87% identity) | TdeDORF1810P | |
| 1812 | V | V.BokCORFAP (62% identity) | V.TdeDORF1810P | |
| 1813 | 94 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1490 | 226 aa hypothetical protein | |||
| 1491 | M | M.DbaSRB1ORF301P (57% identity) | M.TdeDORF1491P | |
| 1492 | R | RarCa6ORF5580P (84% identity) | TdeDORF1491P | |
| 1493 | 226 aa conserved hypothetical protein | |||
| 2274 | nitrate transport ATP-binding subunits C and D | |||
| 2275 | R | AspNO1ORF23265P (77% identity) | TdeDORF2276P | |
| 2276 | M | M.Pgu31ORF490P (65% identity) | M.TdeDORF2276P | |
| 2277 | 127 aa conserved hypothetical protein | |||