Avibacterium paragallinarum ESV-135 |
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Putative Avibacterium paragallinarum ESV-135 RM systems
Ref: Cobos-Justo,M.E. et al. unpublished
REBASE ref # 30287
Complete sequence: 2,521,134 bp
GenBank #: CP050316
REBASE acronym: ApaESV135
Org_num: 39976
All begin HBL79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10990 | MFS transporter | |||
| 10995 | S | S3.ApaAP17ORF9105P (100% identity) | S1.ApaESV135ORF11005P | |
| 11000 | S | S1.ApaAP17ORF9105P (71% identity) | S2.ApaESV135ORF11005P | |
| 11005 | M | M.ApaAP17ORF9105P (100% identity) | M.ApaESV135ORF11005P | |
| 11010 | S | S2.ApaAP17ORF9105P (72% identity) | S3.ApaESV135ORF11005P | |
| 11015 | site-specific integrase | |||
| 11430 | DUF927 domain-containing protein | |||
| 11435 | R | ApaAP17ORF10770P (99% identity) | ApaESV135ORF11455P | |
| 11440 | MFS transporter | |||
| 11445 | 308 aa hypothetical protein | |||
| 11450 | S | S.ApaAP17ORF10770P (100% identity) | S.ApaESV135ORF11455P | |
| 11455 | M | M.ApaAP16ORF10770P (95% identity) | M.ApaESV135ORF11455P | |
| 11460 | 197 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1000 | nucleoside triphosphate pyrophosphohydrolase | |||
| 1005 | M | M.Apap4ORF8230P (100% identity) | M.ApaESV135ORF1005P | |
| 1010 | replication endonuclease | |||
| 1995 | 287 aa hypothetical protein | |||
| 2000 | M | M2.ApaAP17ORF7020P (100% identity) | M1.ApaESV135ORF2000P | |
| 2005 | SAM-dependent DNA methyltransferase | |||
| 2005 | SAM-dependent DNA methyltransferase | |||
| 2010 | M | M.ApaAP17ORF7015P (100% identity) | M.ApaESV135ORF2010P | |
| 2015 | 94 aa hypothetical protein | |||
| 2150 | ATP-binding protein | |||
| 2155 | M | M.ApaCLORF6315P (100% identity) | M.ApaESV135ORF2155P | |
| 2160 | DUF1367 family protein | |||
| 2495 | 159 aa hypothetical protein | |||
| ??? | M | M.ApaAP17ORF6530P (100% identity) | M.ApaESV135ORF2500P | |
| 2505 | R | ApaAP17ORF6530P (100% identity) | ApaESV135ORF2500P | |
| 2510 | valine--tRNA ligase | |||
| 3975 | threonine synthase | |||
| 3980 | M | M2.ApaAP17ORF4160P (100% identity) | M1.ApaESV135ORF3980P | |
| 3985 | R | ApasMORFGP (100% identity) | ApaESV135ORF3980P | |
| 3990 | M | M1.ApaAP17ORF4160P (100% identity) | M2.ApaESV135ORF3980P | |
| 3995 | ArsC family reductase | |||
| 8500 | 48 aa hypothetical protein | |||
| 8505 | RM | ApaAP15ORF545P (100% identity) | ApaESV135ORF8505P | |
| 8510 | phosphoglycerate dehydrogenase | |||
| 11645 | helix-turn-helix transcriptional regulator | |||
| 11650 | M | M1.ApaAP17ORF10970P (100% identity) | M1.ApaESV135ORF11650P | |
| 11655 | M | M2.ApaAP17ORF10970P (100% identity) | M2.ApaESV135ORF11650P | |
| 11660 | RM | ApaAP17ORF10970P (100% identity) | ApaESV135ORF11650P | |
| 11665 | 30S ribosomal protein S12 methylthiotransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3820 | LysR family transcriptional regulator | |||
| ??? | M | M.ApaAP17ORF4320P (100% identity) | M.ApaESV135ORF3825P | |
| 3835 | R | ApaAP17ORF4320P (100% identity) | ApaESV135ORF3825P | |
| 3840 | IS3 family transposase | |||
| 11045 | adenine methyltransferase | |||
| 11050 | M | M.ApaAP17ORF9065P (100% identity) | M.ApaESV135ORF11050P | |
| 11055 | R | ApaAP17ORF9065P (100% identity) | ApaESV135ORF11050P | |
| 11060 | aminoacyl-histidine dipeptidase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7355 | DUF721 domain-containing protein | |||
| ??? | M | M.ApaAP17ORF1680P (100% identity) | M.ApaESV135ORF7360P | |
| 7365 | 3-dehydroquinate synthase | |||