Bifidobacterium longum Jih1 |
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Putative Bifidobacterium longum Jih1 RM systems
Ref: Inoue,H. et al. unpublished
REBASE ref # 30361
Complete sequence: 2,371,107 bp
GenBank #: AP022868
REBASE acronym: BloJih1
Org_num: 40172
All begin BLJIH1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9100 | IS30 family transposase | |||
| 9110 | M | M.Blo7055ORF5710P (98% identity) | M.BloJih1ORF9110P | |
| 9120 | 227 aa hypothetical protein | |||
| 14680 | 192 aa hypothetical protein | |||
| 14690 | R | Blo105ORF1442P (100% identity) | BloJih1ORF14720P | |
| 14700 | ATPase AAA | |||
| 14710 | S | S1.Blo10019I (66% identity) | S.BloJih1ORF14720P | |
| 14720 | M | M.Blo11342ORF9300P (99% identity) | M.BloJih1ORF14720P | |
| 14730 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 150 | 282 aa hypothetical protein | |||
| 160 | M | M.Blo323ORF50P (56% identity) | RGATCY | M.BloJih1ORF160P |
| 170 | R | BloW13ORF9785P (99% identity) | BloJih1ORF160P | |
| 180 | 330 aa hypothetical protein | |||
| 2470 | 408 aa hypothetical protein | |||
| 2480 | M | M.BloB05ORFCP (95% identity) | M.BloJih1ORF2480P | |
| 2490 | R | BloMC42ORF3595P (100% identity) | BloJih1ORF2480P | |
| 2500 | 76 aa hypothetical protein | |||
| 7130 | 122 aa hypothetical protein | |||
| 7140 | M | M.BlosBB02ORF8190P (96% identity) | TCGGCCGA | M.BloJih1ORF7140P |
| 7150 | 114 aa hypothetical protein | |||
| 10660 | 643 aa hypothetical protein | |||
| 10670 | M | M.BloLC67ORFDP (97% identity) | GTCGAC | M.BloJih1ORF10670P |
| 10680 | R | BloLC67ORFDP (100% identity) | GTCGAC | BloJih1ORF10670P |
| 10690 | restriction endonuclease subunit M | |||
| 10680 | 695 aa hypothetical protein | |||
| 10690 | M | M.BloLC67ORFEP (100% identity) | CTGCAG | M.BloJih1ORF10690P |
| 10700 | R | BloLC67ORFEP (100% identity) | CTGCAG | BloJih1ORF10690P |
| 10710 | zinc ribbon domain-containing protein | |||
| 11120 | 54 aa hypothetical protein | |||
| 11130 | M | M.Bps11027ORF8990P (100% identity) | CCWGG | M.BloJih1ORF11130P |
| 11140 | R | Blo5915ORF8560P (99% identity) | CCWGG | BloJih1ORF11130P |
| 11150 | 80 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 830 | 52 aa hypothetical protein | |||
| 840 | R | BloY08ORF400P (82% identity) | BloJih1ORF840P | |
| 850 | 184 aa hypothetical protein | |||
| 14720 | type I restriction-modification system subunit | |||
| 14730 | R | BloNMrrP (100% identity) | BloJih1MrrP | |
| 14740 | 156 aa hypothetical protein | |||