Haloarcula species JP-L23 |
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Putative Haloarcula species JP-L23 RM systems
Ref: Wang,Z. et al. Int. J. Syst. Evol. Microbiol. 66 (8), 3017-3021 (2016)
REBASE ref # 30442
| Sequence length: | GenBank #: | |
| Chromosome: | 3,596,572 bp | CP050014 |
| plasmid unnamed2: | 355,823 bp | CP050016 |
| plasmid unnamed3: | 255,392 bp | CP050017 |
| plasmid unnamed4: | 133,715 bp | CP050018 |
| plasmid unnamed5: | 53,962 bp | CP050019 |
REBASE acronym: HspL23
Org_num: 40389
All begin G9465_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3125 | recombinase family protein | |||
| 3130 | R | Nsp5ORFCP (86% identity) | HspL23ORF3140P | |
| 3135 | S | S.HspRC68ORFDP (45% identity) | S.HspL23ORF3140P | |
| 3140 | M | M.Nsp5ORFCP (84% identity) | M.HspL23ORF3140P | |
| 3145 | 69 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4945 | site-specific integrase | |||
| 4950 | RM | HspLC1ORF2401P (62% identity) | HspL23ORF4950P | |
| 4955 | 498 aa hypothetical protein | |||
| 7560 | FAD-dependent monooxygenase | |||
| 7565 | M | M.HspDT1ORFAP (87% identity) | M.HspL23ORF7565P | |
| 7570 | methyl-accepting chemotaxis protein | |||
| 12230 | helix-turn-helix domain-containing protein | |||
| 12235 | M | M.Hka19301ORFDP (79% identity) | M.HspL23ORF12235P | |
| 12240 | AAA family ATPase | |||
| plasmid unnamed2 | ||||
| 22265 | 154 aa hypothetical protein | |||
| 22270 | RM | HspL23ORF25135P (66% identity) | HspL23ORF22270P | |
| 22275 | 1297 aa hypothetical protein | |||
| 22270 | N-6 DNA methylase | |||
| 22275 | RM | HspTORF18300P (69% identity) | HspL23ORF22275P | |
| 22280 | restriction endonuclease | |||
| plasmid unnamed3 | ||||
| 23715 | IS630 family transposase | |||
| 23720 | RM | HspTH30ORFEP (76% identity) | HspL23ORF23720P | |
| 23725 | 472 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 24805 | 95 aa hypothetical protein | |||
| 24810 | M | M.HspYPL8ORF23540P (35% identity) | M.HspL23ORF24810P | |
| 24815 | 147 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 25130 | DUF4065 domain-containing protein | |||
| 25135 | RM | Hsi33800ORF21160AP (52% identity) | HspL23ORF25135P | |
| 25140 | 59 aa hypothetical protein | |||