Escherichia coli p10A |
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Putative Escherichia coli p10A RM systems
Ref: Shropshire,W.C. unpublished
REBASE ref # 30315
Complete sequence: 4,764,184 bp
GenBank #: CP049081
REBASE acronym: Ecop10A
Org_num: 40096
All begin G6P90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13680 | M48 family metallopeptidase | |||
| 13685 | R | EcosNDM5ORF9185P (100% identity) | Ecop10AORF13685P | |
| 13690 | IS1 family transposase | |||
| 21200 | IS3-like element ISSen4 family transposase | |||
| 21205 | R | EcotcmA3ORF16550P (100% identity) | Ecop10AORF21225P | |
| 21210 | DNA-processing protein DprA | |||
| 21215 | RecQ family ATP-dependent DNA helicase | |||
| 21220 | S | S.EcotcmA3ORF16550P (100% identity) | S.Ecop10AORF21225P | |
| 21225 | M | M.Pre393ORF2750P (100% identity) | M.Ecop10AORF21225P | |
| 21230 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1650 | cell division protein DamX | |||
| 1655 | M | M.UbaC1152DamP (100% identity) | GATC | M.Ecop10ADamP |
| 1660 | ribulose-phosphate 3-epimerase | |||
| 2210 | DUF2556 domain-containing protein | |||
| 2215 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Ecop10AORF2215P |
| 2220 | DNA-binding transcriptional regulator Fis | |||
| 6745 | helix-turn-helix domain-containing protein | |||
| 6750 | M | M.KpnLH102AORF6435P (100% identity) | M.Ecop10AORF6750P | |
| 6755 | DUF968 domain-containing protein | |||
| 8430 | TraR/DksA family transcriptional regulator | |||
| 8435 | M | M.Ecop10BORF14750P (100% identity) | GATC | M.Ecop10AORF8435P |
| 8440 | replication endonuclease | |||
| 13990 | drug/metabolite exporter YedA | |||
| 13995 | V | V.EcosEC7DcmP (100% identity) | V.Ecop10ADcmP | |
| 14000 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Ecop10ADcmP |
| 14005 | phosphohydrolase | |||
| 14230 | RusA family crossover junction | |||
| 14235 | M | M.Ecop10BORF8920P (100% identity) | M.Ecop10AORF14235P | |
| 14240 | transcriptional regulator | |||
| 14280 | 114 aa hypothetical protein | |||
| 14285 | M | M.KpnOC511ORF4989P (100% identity) | M.Ecop10AORF14285P | |
| 14290 | antitoxin | |||
| 17830 | phage holin, lambda family | |||
| 17835 | M | M.SflSTLE1ORF5465P (100% identity) | M.Ecop10AORF17835P | |
| 17840 | 67 aa hypothetical protein | |||
| 19760 | HNH endonuclease | |||
| 19765 | R | SflSTLE4ORF19250P (100% identity) | Ecop10AORF19765P | |
| 19770 | McrC family protein | |||
| 20055 | PAS domain S-box protein | |||
| 20060 | R | SflFF87ORF20150P (100% identity) | Ecop10AORF20060P | |
| 20065 | IS21-like element IS100 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17660 | DUF4113 domain-containing protein | |||
| 17665 | R | Ecop10BGmrSDP (100% identity) | Ecop10AGmrSDP | |
| 17670 | integrase | |||
| 19765 | HNH endonuclease | |||
| 19770 | R | SflSTLE4McrCP (100% identity) | Ecop10AMcrCP | |
| 19775 | R | SflSTLE4McrBP (30% identity) | Ecop10AMcrBP | |
| 19780 | IS1 family transposase | |||