Vibrio species HDW18 |
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Putative Vibrio species HDW18 RM systems
Ref: Hyun,D.-W. and Bae,J.-W. unpublished
REBASE ref # 30257
| Sequence length: | GenBank #: | |
| Chromosome: | 2,495,839 bp | CP049913 |
| plasmid p_unnamed2: | 41,040 bp | CP049915 |
REBASE acronym: VspHDW18
Org_num: 41424
All begin G7083_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 305 | carboxypeptidase M32 | |||
| 310 | R | VspgvcORFCP (97% identity) | VspHDW18ORF330P | |
| 315 | DUF1016 domain-containing protein | |||
| 320 | S | S.Psp20480ORF3517P (55% identity) | S1.VspHDW18ORF330P | |
| 325 | 55 aa hypothetical protein | |||
| 330 | M | M.VspgvcORFCP (94% identity) | M.VspHDW18ORF330P | |
| 335 | multidrug efflux MFS transporter permease | |||
| 3930 | MarR family transcriptional regulator | |||
| 3935 | R | VphVPD14ORF14435P (98% identity) | VspHDW18ORF3960P | |
| 3940 | site-specific DNA-methyltransferase | |||
| 3945 | elongation factor Ts | |||
| 3950 | 49 aa hypothetical protein | |||
| 3955 | 132 aa hypothetical protein | |||
| 3960 | M | M.Vfl8658ORFBP (99% identity) | M.VspHDW18ORF3960P | |
| 3965 | S | S.VpaS1ORFAP (98% identity) | S.VspHDW18ORF3960P | |
| 3970 | 331 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3935 | DEAD/DEAH box helicase family protein | |||
| 3940 | M | M.Vpa114ORF9860P (99% identity) | M.VspHDW18ORF3940P | |
| 3945 | elongation factor Ts | |||
| 5700 | 122 aa hypothetical protein | |||
| ??? | M | M.MmoA19ORF17860P (92% identity) | M.VspHDW18ORF5705P | |
| ??? | R | VbaORF22060P (16% identity) | VspHDW18ORF5705BP | |
| 5710 | IS66 family insertion sequence element accessory | |||
| 5715 | IS66 family insertion sequence element accessory | |||
| 5720 | IS66 family transposase | |||
| 5725 | IS66 family insertion sequence element accessory | |||
| 5730 | IS66 family insertion sequence element accessory | |||
| 5735 | IS66 family transposase | |||
| 5740 | R | VbaORF22060P (64% identity) | VspHDW18ORF5705AP | |
| 5745 | IS66 family transposase | |||
| 7605 | AAA family ATPase | |||
| 7610 | M | M.VspgvcORFFP (98% identity) | M.VspHDW18DamP | |
| 7615 | ribulose-phosphate 3-epimerase | |||
| plasmid p_unnamed2 | ||||
| 14720 | 114 aa hypothetical protein | |||
| 14725 | M | M.Eno230ORFBP (43% identity) | M.VspHDW18ORF14725P | |
| 14730 | 115 aa hypothetical protein | |||