Propioniciclava species HDW11 |
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Putative Propioniciclava species HDW11 RM systems
Ref: Hyun,D.-W. and Bae,J.-W. unpublished
REBASE ref # 30257
Complete sequence: 3,671,901 bp
GenBank #: CP049865
REBASE acronym: PspHDW11
Org_num: 40792
All begin G7070_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8220 | site-specific integrase | |||
| ??? | M | M2.PspHDW11ORF8225P (91% identity) | M1.PspHDW11ORF8225P | |
| 8225 | M | M1.PspHDW11ORF8225P (91% identity) | M2.PspHDW11ORF8225P | |
| 8230 | IS3 family transposase | |||
| 8235 | DDE-type integrase/transposase/recombinase | |||
| 8240 | IS256 family transposase | |||
| 8245 | site-specific integrase | |||
| 8250 | ISL3 family transposase | |||
| 8255 | DNA repair protein | |||
| 8260 | S | S.Dsp184ORFBP (32% identity) | S.PspHDW11ORF8225P | |
| 8265 | M | M4.PspHDW11ORF8225P (78% identity) | M3.PspHDW11ORF8225P | |
| ??? | M | M3.PspHDW11ORF8225P (78% identity) | M4.PspHDW11ORF8225P | |
| 8270 | nucleotidyl transferase AbiEii/AbiGii toxin | |||
| 8275 | 199 aa hypothetical protein | |||
| 8280 | R | Dsp184ORFBP (51% identity) | PspHDW11ORF8225P | |
| 8285 | DUF262 domain-containing protein | |||
| 9600 | restriction endonuclease | |||
| 9605 | R | Taq39ORF14200P (80% identity) | PspHDW11ORF9615P | |
| 9610 | S | S.RbiB403ORF15125P (44% identity) | S.PspHDW11ORF9615P | |
| 9615 | M | M.MreMZT7ORF6455P (83% identity) | M.PspHDW11ORF9615P | |
| 9620 | S8 family serine peptidase | |||
| 10390 | Na+:solute symporter | |||
| 10395 | R | CavCV4ORF4080P (68% identity) | PspHDW11ORF10405P | |
| 10400 | S | S.Csp3108ORF1750P (41% identity) | S.PspHDW11ORF10405P | |
| 10405 | M | M.CavCV4ORF4080P (68% identity) | M.PspHDW11ORF10405P | |
| 10410 | 641 aa hypothetical protein | |||
| 11215 | multicopper oxidase domain-containing protein | |||
| 11220 | M | M.Mal309ORF1205P (50% identity) | M.PspHDW11ORF11220P | |
| 11225 | S | S.OspM54III (31% identity) | S.PspHDW11ORF11220P | |
| 11230 | 48 aa hypothetical protein | |||
| 11235 | R | Rer2895ORF60100P (46% identity) | PspHDW11ORF11220P | |
| 11240 | PQQ-dependent sugar dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1695 | helix-turn-helix domain-containing protein | |||
| 1700 | M | M1.Taq39ORF1910P (100% identity) | M1.PspHDW11ORF1700P | |
| 1705 | M | M2.Taq39ORF1910P (93% identity) | M2.PspHDW11ORF1700P | |
| 1710 | RM | Taq39ORF1910P (100% identity) | PspHDW11ORF1700P | |
| 1715 | heavy metal-responsive transcriptional | |||
| 1830 | DNA-processing protein DprA | |||
| 1835 | M | M.RspW154ORF5270P (99% identity) | M.PspHDW11ORF1835P | |
| 1840 | 505 aa hypothetical protein | |||
| 4460 | 268 aa hypothetical protein | |||
| 4465 | R | Tde17540ORF6160P (90% identity) | PspHDW11ORF4470P | |
| 4470 | M | M.Bsp051ORF12940P (87% identity) | M.PspHDW11ORF4470P | |
| 4475 | recombinase family protein | |||
| 8185 | DEAD/DEAH box helicase | |||
| 8190 | RM | Bsp051ORF15370P (81% identity) | PspHDW11ORF8190P | |
| 8195 | 286 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10290 | 155 aa hypothetical protein | |||
| 10295 | M | M.CmiSORF3033P (33% identity) | M.PspHDW11ORF10295P | |
| 10300 | 84 aa hypothetical protein | |||
| 10305 | R | Mlu211IIP (87% identity) | PspHDW11ORF10295P | |
| 10310 | TIR domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3670 | (deoxy)nucleoside triphosphate | |||
| 3675 | R | RspHY168ORFEP (57% identity) | PspHDW11ORF3675P | |
| 3680 | 156 aa hypothetical protein | |||
| 8195 | 286 aa hypothetical protein | |||
| 8200 | R | Bsp051McrBP (54% identity) | PspHDW11McrBP | |
| 8205 | R | Bsp051McrCP (61% identity) | PspHDW11McrCP | |
| 8210 | 109 aa hypothetical protein | |||
| 8280 | DEAD/DEAH box helicase family protein | |||
| 8285 | R | NspJSGmrSDP (62% identity) | PspHDW11GmrSDP | |
| 8290 | DUF4268 domain-containing protein | |||
| 9595 | 143 aa hypothetical protein | |||
| 9600 | R | Taq39MrrP (67% identity) | PspHDW11MrrP | |
| 9605 | type I restriction endonuclease subunit R | |||