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Putative Gordonia terrae RL-JC02 RM systems
Ref: Ren,L. et al. unpublished
REBASE ref # 30441
Sequence length: | GenBank #: | |
Chromosome: | 5,185,803 bp | CP049836 |
plasmid pPAE01: | 127,051 bp | CP049837 |
REBASE acronym: GteJC02
Org_num: 40386
All begin G8C36_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3560 | TetR/AcrR family transcriptional regulator | |||
3565 | M | M.GhoLY01ORF21200P (100% identity) | M.GteJC02ORF3565P | |
??? | S | S.GhoLY01ORF21200P (73% identity) | S.GteJC02ORF3565P | |
3575 | 95 aa hypothetical protein | |||
3580 | 5-methylcytosine-specific restriction system | |||
3585 | ATP/GTP-binding protein | |||
3590 | IS21 family transposase | |||
3595 | ATP-binding protein | |||
3600 | 126 aa hypothetical protein | |||
3605 | 326 aa hypothetical protein | |||
3610 | R | GhoLY01ORF21200P (100% identity) | GteJC02ORF3565P | |
3615 | 295 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12155 | 125 aa hypothetical protein | |||
12160 | M | M.GhoLY01ORF12600P (97% identity) | M.GteJC02ORF12160P | |
12165 | type IV toxin-antitoxin system AbiEi family | |||
12840 | DUF3427 domain-containing protein | |||
12845 | M | M.GhoLY01ORF11910P (98% identity) | M.GteJC02ORF12845P | |
12850 | R | GhoLY01ORF11910P (99% identity) | GteJC02ORF12845P | |
12855 | helix-turn-helix transcriptional regulator | |||
21160 | HIT family protein | |||
21165 | M | M.GhoLY01ORF3590P (88% identity) | M.GteJC02ORF21165P | |
21170 | 279 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pPAE01 | ||||
23840 | 119 aa hypothetical protein | |||
23845 | M | M.RruY14ORF26265P (21% identity) | M.GteJC02ORF23845AP | |
23850 | site-specific integrase | |||
23855 | 598 aa hypothetical protein | |||
23860 | 623 aa hypothetical protein | |||
23865 | 143 aa hypothetical protein | |||
23870 | NgoFVII family restriction endonuclease | |||
23875 | class I SAM-dependent DNA methyltransferase | |||
23880 | ATP-binding protein | |||
23885 | M | M.RspDMF1ORF26510P (58% identity) | M.GteJC02ORF23845BP | |
23890 | R | Gam43602ORF20150P (90% identity) | GteJC02ORF23845P | |
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12825 | AAA family ATPase | |||
12830 | R | GhoLY01ORF11925P (98% identity) | GteJC02ORF12830AP | |
12835 | IS256 family transposase | |||
12840 | R | Gsp100ORFAP (14% identity) | GteJC02ORF12830BP | |
12845 | N-6 DNA methylase |