Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681 |
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Putative Citrobacter freundii ATCC 8090 = MTCC 1658 = NBRC 12681 RM systems
Ref: Wan,K.H. et al. unpublished
REBASE ref # 30397
Complete sequence: 4,957,773 bp
GenBank #: CP049015
REBASE acronym: Cfr8090
Org_num: 10286
All begin G4551_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3200 | endoribonuclease SymE | |||
| 3205 | S | S.Cfr9750ORF703P (100% identity) | GCANNNNNNNNGTGG | S.Cfr8090ORF3210P |
| 3210 | M | M.SenS146ORFFP (98% identity) | GCANNNNNNNNGTGG | M.Cfr8090ORF3210P |
| 3215 | R | Cfr9750ORF703P (100% identity) | GCANNNNNNNNGTGG | Cfr8090ORF3210P |
| 3220 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1620 | cell division protein DamX | |||
| 1625 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr8090DamP |
| 1630 | ribulose-phosphate 3-epimerase | |||
| 3035 | 239 aa hypothetical protein | |||
| 3040 | R | CfrF2021ORF21355P (100% identity) | Cfr8090ORF3040P | |
| 3045 | HNH endonuclease | |||
| 6240 | DUF4760 domain-containing protein | |||
| 6245 | M | M.Cfr9750ORF1355P (94% identity) | M.Cfr8090ORF6245P | |
| 6250 | 72 aa hypothetical protein | |||
| 6240 | DUF4760 domain-containing protein | |||
| ??? | M | M.Cfr9750ORF1355P (100% identity) | M.Cfr8090ORF1335P | |
| 6250 | 72 aa hypothetical protein | |||
| 6260 | replication endonuclease | |||
| 6265 | M | M.Cfr9750ORF1358P (100% identity) | M.Cfr8090ORF1320P | |
| 6270 | 68 aa hypothetical protein | |||
| 6270 | 68 aa hypothetical protein | |||
| 6275 | M | M.Ero695ORF8615P (100% identity) | GATC | M.Cfr8090ORF1310P |
| 6280 | 3-5 exoribonuclease | |||
| 14000 | RusA family crossover junction | |||
| 14005 | M | M.Cfr9750ORF3057P (100% identity) | M.Cfr8090ORF12687P | |
| 14010 | GntR family transcriptional regulator | |||
| 14545 | drug/metabolite exporter YedA | |||
| 14550 | V | V.CyoL6ORF9385P (100% identity) | V.Cfr8090ORF14555P | |
| 14555 | M | M.CfrZS47ORF10210P (100% identity) | CCWGG | M.Cfr8090ORF14555P |
| 14560 | phosphohydrolase | |||
| 21490 | DNA-binding transcriptional regulator Fis | |||
| 21495 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr8090ORF15019P |
| 21500 | DUF2556 domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20365 | 70 aa hypothetical protein | |||
| 20370 | M | M.Cfr9750ORF4438P (100% identity) | GATC | M.Cfr8090ORF8853P |
| 20375 | DUF2732 family protein | |||