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Putative Lactobacillus iners C0011D1 RM systems
Ref: France,M.T. et al. unpublished
REBASE ref # 30492
Sequence length: | GenBank #: | |
Chromosome: | 1,398,354 bp | CP049226 |
plasmid pC0011D1: | 105,257 bp | CP049227 |
REBASE acronym: Lin11D1
Org_num: 40599
All begin G6Z84_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3695 | endonuclease | |||
3700 | M | M.San211ORF1387P (98% identity) | M.Lin11D1ORF3700P | |
3705 | ATP-binding protein | |||
3705 | ATP-binding protein | |||
??? | R | Sin395ORF124P (83% identity) | Lin11D1ORF3725P | |
??? | M | M.Spn092ORFGP (99% identity) | M.Lin11D1ORF3725P | |
3730 | C | C.Ssp72ORF7430P (100% identity) | C.Lin11D1ORF3725P | |
3735 | DNA-binding protein | |||
5855 | SLC45 family MFS transporter | |||
5860 | R | LinAB1ORFAP (100% identity) | Lin11D1ORF5860P | |
5865 | DNA cytosine methyltransferase | |||
5860 | 256 aa hypothetical protein | |||
5865 | M | M.LinV1bORF384P (98% identity) | M.Lin11D1ORF5865P | |
5870 | DUF4926 domain-containing protein | |||
5900 | AAA family ATPase | |||
5905 | R | PmiKCG1ORF4040P (94% identity) | Lin11D1ORF5910P | |
5910 | M | M.FnuFNUORF7350P (93% identity) | M.Lin11D1ORF5910P | |
5915 | glutamine-hydrolyzing GMP synthase | |||
6035 | 100 aa hypothetical protein | |||
6040 | M | M.Ssp334ORF437P (46% identity) | M.Lin11D1ORF6040P | |
6045 | replication initiator protein A | |||
plasmid pC0011D1 | ||||
7040 | HaeIII family restriction endonuclease | |||
7045 | M | M.LinAORF635P (99% identity) | M.Lin11D1ORF7045P | |
7050 | 354 aa hypothetical protein | |||
7320 | restriction endonuclease subunit M | |||
7325 | R | Lin210C1ORF7190P (100% identity) | Lin11D1ORF7330P | |
7330 | M | M.Lin210C1ORF7190P (100% identity) | M.Lin11D1ORF7330P | |
7335 | 54 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1255 | cholesterol-dependent cytolysin inerolysin | |||
1260 | M | M.Lin94A1ORF1290P (67% identity) | M.Lin11D1ORF1260P | |
1265 | R | LinKYORF4180P (98% identity) | Lin11D1ORF1260P | |
1270 | DUF3800 domain-containing protein |