Lactobacillus salivarius IBB3154 |
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Putative Lactobacillus salivarius IBB3154 RM systems
Ref: Puzia,W. et al. unpublished
REBASE ref # 30505
| Sequence length: | GenBank #: | |
| Chromosome: | 1,921,419 bp | CP027644 |
| plasmid pIBB3154_1: | 230,637 bp | CP027645 |
| plasmid pIBB3154_2: | 13,457 bp | CP027646 |
REBASE acronym: Lsa3154
Org_num: 40618
All begin IBB3154_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1085 | PTS system, cellobiose-specific IIC component | |||
| 1086 | S | S3.LsaZLp4bORFFP (79% identity) | S3.Lsa3154ORF1090P | |
| 1087 | S | S2.LsaZLp4bORFFP (87% identity) | S2.Lsa3154ORF1090P | |
| 1088 | Integrase | |||
| 1089 | S | S1.LsaZLp4bORFFP (99% identity) | S1.Lsa3154ORF1090P | |
| 1090 | M | M.LsaS99ORF7440P (99% identity) | M.Lsa3154ORF1090P | |
| 1091 | R | LsaBNS11ORF475P (99% identity) | Lsa3154ORF1090P | |
| 1092 | 54 aa hypothetical protein | |||
| plasmid pIBB3154_1 | ||||
| 36 | site-specific integrase | |||
| 37 | S | S.LsaL28ORF7040P (98% identity) | S1.Lsa3154ORF38P | |
| 38 | M | M.Lsa212ORF8580P (98% identity) | M.Lsa3154ORF38P | |
| 39 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 30 | Permease of the drug/metabolite transporter DMT | |||
| ??? | M | M.EmuP2005ORFAP (64% identity) | M.Lsa3154ORF31P | |
| 33 | R | Ssp872ORF2330P (51% identity) | Lsa3154ORF31P | |
| 34 | Oligoendopeptidase F | |||
| 448 | Acetylornithine | |||
| 449 | M | M.Lsa840ORF851P (96% identity) | M.Lsa3154ORF449P | |
| 450 | RM | Lsa840ORF852P (100% identity) | Lsa3154ORF449AP | |
| 451 | RM | Lsa840ORF853P (98% identity) | Lsa3154ORF449BP | |
| 453 | 94 aa hypothetical protein | |||
| 1025 | 759 aa hypothetical protein | |||
| 1026 | R | LsaA3ORF3950P (91% identity) | Lsa3154ORF1027P | |
| 1027 | M | M.LsaA3ORF3950P (99% identity) | M.Lsa3154ORF1027P | |
| 1028 | 72 aa hypothetical protein | |||
| 1135 | Hemagglutinin-like protein | |||
| 1136 | RM | LsaS01ORF4600P (98% identity) | Lsa3154ORF1136P | |
| 1137 | NADP-dependent oxidoreductase | |||
| plasmid pIBB3154_1 | ||||
| 117 | 58 aa hypothetical protein | |||
| 118 | S | S.LsaL28ORF8120P (100% identity) | S.Lsa3154ORF119P | |
| 119 | RM | LsaL28ORF8120P (99% identity) | Lsa3154ORF119P | |
| 120 | PIN domain-containing protein | |||
| plasmid pIBB3154_2 | ||||
| 10 | 262 aa hypothetical protein | |||
| 11 | R | Bth13ORF130024P (34% identity) | Lsa3154ORF12P | |
| 12 | M | M.Ssa7778AORF200374P (67% identity) | M.Lsa3154ORF12P | |
| 13 | recombinase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1478 | 430 aa hypothetical protein | |||
| 1479 | R | LsaLPM01ORFCP (98% identity) | Lsa3154ORF1480P | |
| 1480 | M | M.Lsa12574ORF5695P (99% identity) | M.Lsa3154ORF1480P | |
| 1481 | 38 aa hypothetical protein | |||
| plasmid pIBB3154_1 | ||||
| 39 | 62 aa hypothetical protein | |||
| ??? | M | M1.LsaSORF1758eP (92% identity) | M3.Lsa3154ORF42P | |
| 42 | M | M.LsaA3ORF6875P (98% identity) | M2.Lsa3154ORF42P | |
| ??? | M | M3.Lsa006ORF10485P (96% identity) | M1.Lsa3154ORF42P | |
| 45 | R | LsaA3ORF6880P (98% identity) | Lsa3154ORF42P | |
| 46 | 966 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1583 | Inosine-5-monophosphate dehydrogenase / CBS | |||
| ??? | R | LsaSGL03ORF410P (99% identity) | Lsa3154ORF1584P | |
| 1585 | protein tyrosine phosphatase | |||