Yokenella regensburgei NCTC11967 |
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Putative Yokenella regensburgei NCTC11967 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,911,525 bp
GenBank #: UAVL00000000 (NZ_UAVL00000000)
REBASE acronym: Yre11967
Org_num: 42864
All begin NCTC11967_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4346 | Transposase | |||
| 4347 | R | Yre11968IP (100% identity) | GCANNNNNNCTGG | Yre11967IP |
| 4348 | Uncharacterized protein conserved in bacteria | |||
| 4349 | S | S.Yre11968I (100% identity) | GCANNNNNNCTGG | S.Yre11967I |
| 4350 | M | M.Yre11968I (100% identity) | GCANNNNNNCTGG | M.Yre11967I |
| 4351 | Uncharacterised protein | |||
| 2272 | EcoKMrr | |||
| 2273 | M | M.Yre11968II (100% identity) | TGACNNNNNNGTC | M.Yre11967II |
| 2274 | S | S.Yre11968II (100% identity) | TGACNNNNNNGTC | S.Yre11967II |
| 2275 | R | Yre11968IIP (100% identity) | TGACNNNNNNGTC | Yre11967IIP |
| 2277 | Predicted membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1886 | Uncharacterised protein | |||
| 1887 | M | M.Yre11968ORF4837P (100% identity) | M.Yre11967ORF1887P | |
| 1888 | Uncharacterised protein | |||
| 1889 | Uncharacterised protein | |||
| 1890 | M | M.Yre11968ORF4796P (100% identity) | M.Yre11967ORF1890P | |
| 1891 | Bacteriophage replication gene A protein (GPA) | |||
| 1892 | Uncharacterised protein | |||
| 1893 | M | M.Yre11968ORF4799P (100% identity) | M.Yre11967ORF1893P | |
| 1894 | phage portal protein, PBSX family | |||
| 4110 | Uncharacterised protein | |||
| ??? | M | M.YreW13DcmP (100% identity) | M.Yre11967DcmP | |
| 4112 | V | V.Yre11968DcmP (100% identity) | V.Yre11967DcmP | |
| 4113 | Uncharacterized inner membrane transporter yedA | |||
| 4467 | Plasmid stability protein | |||
| ??? | M | M.Yre11968ORF3663P (100% identity) | M.Yre11967ORF4468P | |
| 4469 | R | Yre11968ORF3663P (100% identity) | Yre11967ORF4468P | |
| 4470 | Uncharacterised protein | |||
| 2375 | ParB-like nuclease domain | |||
| 2376 | M | M.Yre11968III (100% identity) | TGGCCA | M.Yre11967III |
| 2377 | Prophage CP4-57 integrase | |||
| 3555 | cell division protein DamX | |||
| 3556 | M | M.YreW13DamP (100% identity) | M.Yre11967DamP | |
| 3557 | Ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2271 | Uncharacterized protein conserved in bacteria | |||
| 2272 | R | Yre11968MrrP (100% identity) | Yre11967MrrP | |
| 2273 | Type I restriction enzyme EcoKI M protein | |||