Vibrio parahaemolyticus NCTC10884 |
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Putative Vibrio parahaemolyticus NCTC10884 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,375,494 bp
GenBank #: UHIM00000000 (NZ_UHIM00000000)
REBASE acronym: Vph10884
Org_num: 42661
All begin NCTC10884_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3872 | integrase family protein | |||
| 3873 | M | M.VnaAGA4ORFAP (98% identity) | CAACNNNNGTC | M.Vph10884II |
| 3874 | S | S.Vpa16ORF23345P (62% identity) | CAACNNNNGTC | S.Vph10884II |
| 3875 | ATPase involved in DNA repair | |||
| 3876 | Uncharacterized protein conserved in bacteria | |||
| 3877 | R | PciZF2ORF19890P (98% identity) | CAACNNNNGTC | Vph10884IIP |
| 3878 | relaxase NikB | |||
| 1859 | Uncharacterised protein | |||
| 1860 | R | Vpa4557ORF22590P (99% identity) | GAAYNNNNNNRTAG | Vph10884IP |
| 1861 | Predicted ATP-binding protein involved in | |||
| 1862 | M | M.Vpa4557ORF22590P (100% identity) | GAAYNNNNNNRTAG | M.Vph10884I |
| 1863 | S | S.Vpa4557ORF22590P (100% identity) | GAAYNNNNNNRTAG | S.Vph10884I |
| 1864 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1634 | ribulose-phosphate 3-epimerase | |||
| 1635 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vph10884Dam |
| 1636 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3699 | Uncharacterized conserved protein | |||
| 3700 | R | Vga104291ORFBP (96% identity) | GAGAGC | Vph10884IIIP |
| 3701 | Uncharacterised protein | |||
| 3702 | recombinase RecF | |||
| 3703 | M | M.Pda1605ORF21095P (46% identity) | GAGAGC | M.Vph10884III |
| 3704 | Uncharacterised protein | |||