Veillonella criceti NCTC12020 |
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Putative Veillonella criceti NCTC12020 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,245,419 bp
GenBank #: UHIO00000000 (NZ_UHIO00000000)
REBASE acronym: Vcr12020
Org_num: 42835
All begin NCTC12020_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2049 | Uncharacterised protein | |||
| 2050 | R | Vcr12020IP (100% identity) | Vcr12020ORF2055P | |
| 2051 | S | S2.Vcr12020I (33% identity) | S2.Vcr12020ORF2055P | |
| 2052 | Tyrosine recombinase XerC | |||
| 2053 | S | S2.Vcr12020I (67% identity) | S1.Vcr12020ORF2055P | |
| 2054 | Uncharacterised protein | |||
| 2055 | M | M.Vcr12020I (100% identity) | M.Vcr12020ORF2055P | |
| 2056 | DNA polymerase IV | |||
| 615 | Uncharacterised protein | |||
| 616 | R | Vcr12020ORF2055P (100% identity) | Vcr12020IP | |
| 617 | S | S1.Vcr12020ORF2055P (67% identity) | S2.Vcr12020I | |
| 618 | Tyrosine recombinase XerC | |||
| 619 | S | S.EbaCHKC4ORF1360P (47% identity) | GAGNNNNNNTCC | S1.Vcr12020I |
| 620 | M | M.Vcr12020ORF2055P (100% identity) | GAGNNNNNNTCC | M.Vcr12020I |
| 621 | DNA polymerase IV | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 970 | Integrase | |||
| ??? | M | M1.Btr13244ORF9850P (64% identity) | M1.Vcr12020ORF971P | |
| 972 | Uncharacterised protein | |||
| 973 | R | Vlu1362ORF9750P (60% identity) | Vcr12020ORF971P | |
| 974 | M | M.BspG32015ORF15195P (74% identity) | M2.Vcr12020ORF971P | |
| 975 | Uncharacterized conserved protein | |||
| 1323 | Uncharacterised protein | |||
| 1324 | R | SspF0704IP (70% identity) | R1.Vcr12020ORF1325P | |
| 1325 | M | M.Spe700780ORF1412P (75% identity) | M.Vcr12020ORF1325P | |
| 1326 | Transposase DDE domain | |||
| 1327 | R | Cpi7262ORF589P (60% identity) | R2.Vcr12020ORF1325P | |
| 1328 | Uncharacterized protein conserved in bacteria | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 652 | Ferredoxin | |||
| 653 | R | Ebo30301McrCP (78% identity) | Vcr12020McrCP | |
| 654 | 5-methylcytosine-specific restriction enzyme B | |||
| 653 | 5-methylcytosine-specific restriction enzyme | |||
| 654 | R | LbaNSJ8McrBP (51% identity) | Vcr12020McrBP | |
| 655 | 23S rRNA (uracil-C(5))-methyltransferase RlmCD | |||