Salmonella enterica subsp. enterica NCTC92 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica NCTC92 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,798,308 bp
GenBank #: UFRE00000000 (NZ_UFRE00000000)
REBASE acronym: Sen92
Org_num: 42327
All begin NCTC92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4031 | membrane protein | |||
| 4032 | R | Sens661ORF19445P (100% identity) | GTANNNNNNNNGTTC | Sen92IIIP |
| 4033 | M | M.SenWT8I (100% identity) | GTANNNNNNNNGTTC | M.Sen92III |
| 4034 | S | S.Sens661ORF19445P (100% identity) | GTANNNNNNNNGTTC | S.Sen92III |
| 4036 | protein of uncharacterised function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 364 | DamX protein | |||
| 365 | M | M.StyTDamP (100% identity) | GATC | M.Sen92Dam |
| 366 | ribulose-phosphate 3-epimerase | |||
| 463 | protein yhdU | |||
| 464 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen92II |
| 465 | Fis DNA-binding protein | |||
| 651 | Protein of uncharacterised function (DUF2732) | |||
| 652 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen92ORF652P | |
| 653 | Phage replication protein | |||
| 1226 | bacteriophage protein | |||
| ??? | M | M.SenKKORF17465P (100% identity) | M.Sen92ORF1227P | |
| 1228 | phage-type endonuclease | |||
| 1918 | metal-dependent phospho hydrolase | |||
| 1919 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen92DcmP |
| 1920 | V | V.StyUK1DcmP (100% identity) | V.Sen92DcmP | |
| 1921 | inner membrane transporter yedA | |||
| 4062 | Uncharacterised protein | |||
| 4063 | R | Sens661ORF19605P (99% identity) | Sen92ORF4064P | |
| ??? | M | M.Sens661ORF19605P (100% identity) | M.Sen92ORF4064P | |
| 4065 | superfamily I DNA helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3590 | cytoplasmic protein | |||
| 3591 | R | Sens29927ORF17960P (100% identity) | CAGAG | Sen92IP |
| 3592 | M | M.SenUA38ORF1080P (100% identity) | CAGAG | M.Sen92I |
| 3593 | metabolite transport protein | |||