Salmonella enterica subsp. enterica NCTC12116 |
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Putative Salmonella enterica subsp. enterica NCTC12116 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,964,868 bp
GenBank #: UGXV00000000 (NZ_UGXV00000000)
REBASE acronym: Sen12116
Org_num: 42316
All begin NCTC12116_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1652 | restriction endonuclease | |||
| ??? | R | StyLT2IIP (99% identity) | GAGNNNNNNRTAYG | Sen12116IIIP |
| 1656 | SAM-dependent methyltransferase | |||
| ??? | M | M.StyLTIII (95% identity) | GAGNNNNNNRTAYG | M.Sen12116III |
| 1660 | S | S.StyUK1II (99% identity) | GAGNNNNNNRTAYG | S.Sen12116III |
| 1662 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 357 | cytoplasmic protein | |||
| 358 | M | M.StyUK1ORFAP (100% identity) | M.Sen12116ORF358P | |
| 359 | cytoplasmic protein | |||
| 3079 | DamX protein | |||
| ??? | M | M.StyTDamP (99% identity) | GATC | M.Sen12116Dam |
| 3082 | ribulose-phosphate 3-epimerase | |||
| 3188 | protein yhdU | |||
| 3189 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen12116II |
| 3190 | Fis DNA-binding protein | |||
| 1693 | DNA repair ATPase | |||
| ??? | RM | StyUK1IV (100% identity) | GATCAG | Sen12116IV |
| 1696 | spermidine/putrescine ABC transporter ATPase | |||
| 5162 | inner membrane transporter yedA | |||
| 5163 | V | V.StyUK1DcmP (100% identity) | V.Sen12116DcmP | |
| 5164 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen12116DcmP |
| 5165 | metal-dependent phospho hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1167 | cytoplasmic protein | |||
| 1168 | R | StyUK1IP (99% identity) | CAGAG | Sen12116IP |
| 1169 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen12116I |
| 1170 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1651 | membrane protein | |||
| 1652 | R | StyUK1MrrP (100% identity) | Sen12116MrrP | |
| 1653 | type I restriction enzyme EcoKI subunit R | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3950 | C4-type zinc finger protein, DksA/TraR family | |||
| 3951 | M | M.StyLTORF13745P (100% identity) | M.Sen12116ORF3951P | |
| 3952 | Bacteriophage replication gene A protein (GPA) | |||