Salmonella enterica NCTC6022 |
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Putative Salmonella enterica NCTC6022 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,931,547 bp
GenBank #: UGVT00000000 (NZ_UGVT00000000)
REBASE acronym: Sen6022
Org_num: 42290
All begin NCTC6022_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4050 | restriction endonuclease | |||
| 4051 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen6022IIIP |
| 4052 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen6022III |
| 4053 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen6022III |
| 4055 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 68 | yfaB | |||
| 69 | M | M.Sen388789ORF22850P (100% identity) | M.Sen6022ORF69P | |
| 70 | Uncharacterized protein yubE | |||
| 488 | DamX protein | |||
| 489 | M | M.StyTDamP (100% identity) | GATC | M.Sen6022DamP |
| 490 | ribulose-phosphate 3-epimerase | |||
| 587 | protein yhdU | |||
| 588 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen6022II |
| 589 | Fis DNA-binding protein | |||
| 1925 | metal-dependent phospho hydrolase | |||
| 1926 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen6022Dcm |
| 1927 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen6022DcmP |
| 1928 | inner membrane transporter yedA | |||
| 4080 | Uncharacterised protein | |||
| ??? | R | SenS25ORF20520P (100% identity) | Sen6022ORF4081P | |
| 4082 | malate transporter | |||
| 4085 | Uncharacterised protein | |||
| 4086 | M | M.SspZ69DndBP (100% identity) | M.Sen6022DndBP | |
| 4087 | phosphoadenosine phosphosulfate reductase | |||
| 4086 | bacteriophage protein | |||
| 4087 | M | M.SenS25DndCP (100% identity) | M.Sen6022DndCP | |
| 4088 | ATPase involved in DNA repair | |||
| 4087 | phosphoadenosine phosphosulfate reductase | |||
| 4088 | M | M.SenS0870DndDP (100% identity) | M.Sen6022DndDP | |
| 4089 | DNA sulfur modification protein DndE | |||
| 4088 | ATPase involved in DNA repair | |||
| 4089 | M | M.SspZ69DndEP (100% identity) | M.Sen6022DndEP | |
| 4090 | Uncharacterized conserved protein | |||
| 4090 | Uncharacterized conserved protein | |||
| 4091 | R | SenS25DptHP (100% identity) | Sen6022DptHP | |
| 4092 | DNA phosphorothioation-dependent restriction | |||
| 4091 | Type IV secretory pathway, VirB4 components | |||
| 4092 | R | SspZ69DptGP (100% identity) | Sen6022DptGP | |
| 4093 | DNA phosphorothioation-dependent restriction | |||
| 4092 | DNA phosphorothioation-dependent restriction | |||
| 4093 | R | SenS25DptFP (100% identity) | Sen6022DptFP | |
| 4094 | integrase | |||
| 4391 | lexA DNA binding domain-containing protein | |||
| 4392 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen6022ORF4392P |
| 4393 | phage O protein family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3544 | cytoplasmic protein | |||
| 3545 | R | SenS133ORF17655P (100% identity) | CAGAG | Sen6022IP |
| 3546 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen6022I |
| 3547 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4049 | membrane protein | |||
| 4050 | R | StyUK1MrrP (100% identity) | Sen6022MrrP | |
| 4051 | type I restriction enzyme EcoKI subunit R | |||