Salmonella enterica NCTC3072 |
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Putative Salmonella enterica NCTC3072 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,714,822 bp
GenBank #: UGWU00000000 (NZ_UGWU00000000)
REBASE acronym: Sen3072
Org_num: 42280
All begin NCTC3072_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3798 | restriction endonuclease | |||
| 3799 | R | SenNCTR462ORF2380P (99% identity) | CCANNNNNNNNTGAG | Sen3072IVP |
| 3800 | M | M.SenNCTR462ORF2380P (99% identity) | CCANNNNNNNNTGAG | M.Sen3072IV |
| 3801 | S | S.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | S.Sen3072IV |
| 3803 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4540 | Uncharacterized protein yubE | |||
| 4541 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Sen3072ORF4541P |
| 4542 | yfaB | |||
| 361 | DamX protein | |||
| 362 | M | M.StyTDamP (100% identity) | GATC | M.Sen3072Dam |
| 363 | ribulose-phosphate 3-epimerase | |||
| 460 | protein yhdU | |||
| 461 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3072III |
| 462 | Fis DNA-binding protein | |||
| 1767 | metal-dependent phospho hydrolase | |||
| 1768 | M | M.SenNCTR462DcmP (100% identity) | CCWGG | M.Sen3072DcmP |
| 1769 | V | V.StyUK1DcmP (100% identity) | V.Sen3072DcmP | |
| 1770 | inner membrane transporter yedA | |||
| 3828 | Uncharacterised protein | |||
| 3829 | R | Sens24219ORF19960P (100% identity) | Sen3072ORF3829P | |
| 3830 | RES domain | |||
| 3833 | Uncharacterised protein | |||
| 3834 | M | M.SenAnaIV (100% identity) | CCWWGG | M.Sen3072II |
| 3835 | R | SenAnaIVP (93% identity) | CCWWGG | Sen3072IIP |
| 3836 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3357 | cytoplasmic protein | |||
| 3358 | R | SenNCTR462ORF9180P (99% identity) | CAGAG | Sen3072IP |
| 3359 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.Sen3072I |
| 3360 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3797 | membrane protein | |||
| 3798 | R | SenNCTR462MrrP (100% identity) | Sen3072MrrP | |
| 3799 | type I restriction enzyme EcoKI subunit R | |||