Dolichospermum flos-aquae CCAP 1403/13F |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Dolichospermum flos-aquae CCAP 1403/13F RM systems
Ref: Wu,V. unpublished
REBASE ref # 30165
| Sequence length: | GenBank #: | |
| Chromosome: | 5,151,752 bp | CP051206 |
| plasmid pAfl69: | 68,932 bp | CP051207 |
REBASE acronym: Afl
Org_num: 140
All begin HGD76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16255 | RloB domain-containing protein | |||
| 16260 | R | Ski73ORF29360P (10% identity) | AflORF16260P | |
| 16265 | N-acetylmuramoyl-L-alanine amidase | |||
| 16935 | exonuclease subunit SbcC | |||
| 16940 | R | Asp7108ORFIP (94% identity) | AflORF16945P | |
| 16945 | M | M.Asp7108ORFIP (97% identity) | M.AflORF16945P | |
| 16950 | S | S2.Ava27893ORFNP (41% identity) | S.AflORF16945P | |
| 16955 | conjugal transfer protein TrbI | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 635 | glutathione-disulfide reductase | |||
| 640 | M | M.Asp90ORF11791P (93% identity) | M.AflORF640P | |
| 645 | histidinol-phosphate transaminase | |||
| 2205 | DUF3883 domain-containing protein | |||
| 2210 | M | M2.AspWA102ORF18600P (99% identity) | GGTCTC | M1.AflVIIIP |
| 2215 | M | M1.AspWA102ORF18600P (97% identity) | GGTCTC | M2.AflVIII |
| 2220 | helix-turn-helix domain-containing protein | |||
| 3220 | 97 aa hypothetical protein | |||
| 3225 | M | M.AflORFD1AP (100% identity) | M.AflORF3225AP | |
| 3230 | ISAs1-like element ISAsp2 family transposase | |||
| 3235 | M | M.Dsp315AORF3411P (71% identity) | M.AflORF3225BP | |
| 3240 | AAA family ATPase | |||
| 3845 | type I restriction endonuclease subunit R | |||
| 3850 | RM | Afl2012ORF12385P (40% identity) | AflORF3850P | |
| 3855 | 167 aa hypothetical protein | |||
| 4295 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | |||
| ??? | R | Afl81ORFKP (84% identity) | AflORF4310P | |
| 4310 | M | M.Dsp315AORF2628P (98% identity) | GRCGYC | M.AflORF4310P |
| 4315 | ATP-binding domain-containing protein | |||
| 4765 | cytochrome b/b6 domain-containing protein | |||
| 4770 | R | Dco806ORF3200P (91% identity) | GGCC | AflVIP |
| 4775 | M | M.Asp90ORF10755P (98% identity) | GGCC | M.AflVI |
| 4780 | anthranilate phosphoribosyltransferase | |||
| 5210 | Uma2 family endonuclease | |||
| 5215 | C | C.Asp90ORF10936P (100% identity) | C.AflIIIP | |
| 5220 | R | Afl14aORF10005P (98% identity) | ACRYGT | AflIII |
| 5225 | M | M.Asp90ORF10936P (100% identity) | ACRYGT | M.AflIII |
| 5230 | glucose-1-phosphate adenylyltransferase | |||
| 5830 | DUF1963 domain-containing protein | |||
| 5835 | R | Asp90ORF11009P (100% identity) | CAGCTG | AflORF5840P |
| 5840 | M | M.Asp90ORF11009P (98% identity) | CAGCTG | M.AflORF5840P |
| 5845 | 52 aa hypothetical protein | |||
| 6745 | Uma2 family endonuclease | |||
| 6750 | RM | Asp7108ORFGP (87% identity) | AflORF6750P | |
| 6755 | 107 aa hypothetical protein | |||
| 6795 | lipocalin/fatty-acid binding family protein | |||
| 6800 | M | M.Asp90ORF11293P (95% identity) | RCCGGY | M.AflIX |
| 6805 | deoxyribose-phosphate aldolase | |||
| 8820 | 125 aa hypothetical protein | |||
| 8825 | RM | Asp90ORF12690P (99% identity) | CTGGAG | AflORF8825P |
| 8830 | lipid-A-disaccharide synthase | |||
| 9950 | FAD-binding oxidoreductase | |||
| 9955 | M | M.Afl2012ORF8410P (99% identity) | GGWCC | M.AflORFVP |
| 9960 | 64 aa hypothetical protein | |||
| 10105 | 101 aa hypothetical protein | |||
| 10110 | RM | Dsp315AORF1554P (85% identity) | AflORF10110P | |
| 10115 | 74 aa hypothetical protein | |||
| 10210 | Uma2 family endonuclease | |||
| 10215 | M | M.Dco806ORF11790P (98% identity) | GAATTC | M.AflV |
| 10220 | R | Asp90ORF11059P (25% identity) | GAATTC | AflVP |
| 10225 | type II toxin-antitoxin system PemK/MazF family | |||
| 10525 | DUF751 family protein | |||
| 10530 | M | M.Asp90ORF11384P (98% identity) | GATC | M.AflVII |
| 10535 | HetZ-related protein | |||
| 11985 | magnesium chelatase subunit H | |||
| 11990 | M | M.Afl14aORF6265P (94% identity) | GGWCC | M.AflORF11990P |
| 11995 | R | Nsp5183ORF3195P (87% identity) | GGWCC | AflORF11990P |
| 12000 | 125 aa hypothetical protein | |||
| 12025 | Uma2 family endonuclease | |||
| 12030 | M | M.Afl81ORFWP (99% identity) | M.AflORF12030P | |
| 12035 | R | Afl81ORFWP (59% identity) | AflORF12030P | |
| 12040 | 156 aa hypothetical protein | |||
| 12240 | tetratricopeptide repeat protein | |||
| 12245 | M | M.Dco806ORF18690P (90% identity) | RCATGY | M.AflORF12245P |
| 12250 | R | Afl14aORF4015P (84% identity) | RCATGY | AflORF12245P |
| 12255 | C | C.Sto24ORF17580P (92% identity) | C.AflORF12245P | |
| 12260 | RNA helicase | |||
| 12995 | Uma2 family endonuclease | |||
| 13000 | RM | Asp90ORF12024P (91% identity) | AflORF13000P | |
| 13005 | ISAs1-like element ISAsp2 family transposase | |||
| 13165 | AmpG family muropeptide MFS transporter | |||
| 13170 | M | M.Dsp315ADndEP (99% identity) | M.AflDndEP | |
| 13175 | HNH endonuclease | |||
| 13180 | 89 aa hypothetical protein | |||
| 13185 | M | M.Dco806DndDP (96% identity) | M.AflDndDP | |
| 13190 | DNA phosphorothioation system sulfurtransferase | |||
| 13185 | DNA sulfur modification protein DndD | |||
| 13190 | M | M.Dsp315ADndCP (99% identity) | M.AflDndCP | |
| 13195 | DGQHR domain-containing protein | |||
| 13195 | DGQHR domain-containing protein | |||
| 13200 | R | Dhe447ORF5010P (96% identity) | AflORF13200P | |
| 13205 | DNA phosphorothioation-associated protein 4 | |||
| 13870 | 226 aa hypothetical protein | |||
| 13875 | RM | Csp4074ORF54620P (81% identity) | AflORF13875P | |
| 13880 | MerR family transcriptional regulator | |||
| 15325 | alpha/beta hydrolase | |||
| 15330 | RM | Csp7822ORF4308P (39% identity) | AflORF15330P | |
| 15335 | 170 aa hypothetical protein | |||
| 16225 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 16230 | C | C.Dhe447ORF2035P (100% identity) | C.AflORF16240P | |
| 16235 | R | Dco806ORF8600P (100% identity) | AGTACT | AflORF16240P |
| 16240 | site-specific DNA-methyltransferase | |||
| 16235 | ScaI family restriction endonuclease | |||
| 16240 | M | M.Afl2012ORF15245P (99% identity) | AGTACT | M.AflIVP |
| 16245 | bifunctional | |||
| 17935 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | |||
| 17940 | M | M.Cap10605ORF1884P (65% identity) | M.AflORF17940P | |
| 17945 | ubiquinol-cytochrome c reductase iron-sulfur | |||
| 18270 | 78 aa hypothetical protein | |||
| 18275 | R | CraCYRFORFIP (86% identity) | CTTAAG | AflII |
| 18280 | M | M.Dsp315AORF4036P (92% identity) | CTTAAG | M.AflII |
| 18285 | phosphoketolase | |||
| 18500 | flotillin family protein | |||
| 18505 | RM | Asp90ORF12865P (98% identity) | AflORF18505P | |
| 18510 | F0F1 ATP synthase subunit epsilon | |||
| 19080 | Uma2 family endonuclease | |||
| 19085 | RM | Asp90ORF10517P (99% identity) | AflORF19085P | |
| 19090 | DUF29 domain-containing protein | |||
| 19845 | ATP-binding protein | |||
| 19850 | M | M.Dco806ORF9270P (98% identity) | M.AflORF19850P | |
| 19855 | 55 aa hypothetical protein | |||
| 21055 | 291 aa hypothetical protein | |||
| 21060 | M | M.Asp90ORF13221P (98% identity) | M.AflORF21060P | |
| 21065 | R | Dsp315AORF3316P (96% identity) | AflORF21060P | |
| 21070 | aldo/keto reductase | |||
| 21425 | type II toxin-antitoxin system RelE/ParE family | |||
| 21430 | RM | Dsp315AORF2969P (95% identity) | AflORF21430P | |
| 21435 | methionine synthase | |||
| 21470 | lipid-A-disaccharide synthase | |||
| 21475 | M | M.Dsp315AORF2959P (94% identity) | CGATCG | M.AflORF21475P |
| 21480 | 155 aa hypothetical protein | |||
| plasmid pAfl69 | ||||
| 24570 | four helix bundle protein | |||
| 24575 | RM | Dco806ORF44080AP (81% identity) | AflORF24575P | |
| 24580 | 74 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22170 | GxxExxY protein | |||
| 22175 | R | Asp90McrBP (43% identity) | AflMcrBP | |
| 22180 | R | Dsp315AMcrCP (91% identity) | AflMcrCP | |
| 22185 | Rpn family recombination-promoting | |||