Pseudomonas aeruginosa NCTC13716 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa NCTC13716 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 7,043,294 bp
GenBank #: UAUB00000000 (NZ_UAUB00000000)
REBASE acronym: Pae13716
Org_num: 42228
All begin NCTC13716_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1268 | methyl-accepting chemotaxis protein | |||
| 1269 | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.Pae13716III |
| 1270 | M | M.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | M.Pae13716III |
| 1271 | phage integrase | |||
| 4827 | xenobiotic reductase A | |||
| 4828 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | Pae13716IP |
| 4829 | carbon storage regulator related protein | |||
| ??? | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.Pae13716I |
| 4831 | M | M.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | M.Pae13716I |
| 4832 | Uncharacterised protein | |||
| 6448 | Uncharacterised protein | |||
| 6449 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae13716IIP |
| 6450 | Uncharacterised protein | |||
| 6451 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae13716II |
| ??? | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae13716II |
| 6453 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1278 | ATP-binding protein | |||
| 1279 | M | M.PaesAG1ORF2662P (100% identity) | M.Pae13716ORF1279P | |
| 1280 | transposase family IS66 | |||
| 896 | DNA binding protein | |||
| 897 | M | M.PaesAG1ORF5438P (100% identity) | M.Pae13716ORF897P | |
| 898 | nucleoid-associated protein NdpA | |||
| 2132 | Uncharacterised protein | |||
| 2133 | R | PmeTTORFEP (100% identity) | CTCGAG | Pae13716IVP |
| 2134 | M | M.PaesAG1ORF5666P (100% identity) | CTCGAG | M.Pae13716IV |
| 2135 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3452 | chromosome segregation protein SMC | |||
| 3453 | R | Pae38182ORF6460P (100% identity) | Pae13716ORF3454P | |
| 3454 | M | M.SmaCRE01ORF34370P (36% identity) | M.Pae13716ORF3454P | |
| 3455 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1263 | R | PaesAG1McrCP (100% identity) | Pae13716McrCP | |
| 1264 | R | Psp2021McrBP (67% identity) | Pae13716McrBP | |
| 1265 | SNF2 helicase | |||